Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00778 ATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATCTGGGACCGTGGAAAAACCATTTGCTTGAAGAAAATCTTAAGTTTACCTCTCATAGCAATAACATACGGTTACAGAATGTAGCCAGTCCATCGTCTCTTTTATTTCAGCAGAAGAACACTTGGAGCAGTCATTTATTTAGCTTGAAATACCCACCTAGTTACGTTGTGCCTTCTAGATACAATGCATTCAGGTGCCATTCGTCATTGATGACAAACCAACCACTGGATCCCTCTGGGATGAAGGCTGCTATAGTGGCGTTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTTGTTAAGATGGTTCCTGCAGTTAGTATTATGATATTTGCTGTATGGGGTCTTGGACCATTTTTGCGTTATACAAGAAGCCTACTCCATAGTGATAGTAACTGGAAGAAAAGCCAGACATATAAAGTCATGACCTTGTATCTTCAACCATTATTTCTATGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACGGAGTCTAGCCAAGTTGTGAAGCAACGGGTGTTGAATTTTGTTAGGTCATTGTCCACTGTACTGGCCTTTGCGTATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGACTAGTGAATCCAGTGATGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTGTACTCTGCAGTATGGGTTGCTGCTCTCTCATTGTTCATGGAGCTGTTAGGCTTTTCAACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGCTGACATTAGCTGGCCGCGAGATTTTCACCAACTTTCTCTCAAGTGTAATGATTCATGCAACCCGTCCTTTCGTTGTAAATGAGTGGATCCAAACGAGGATCGAGGGCTATGAAGTTTCTGGAACTGTTGAGAAACATGTCTTATACGAACACGTTAGGCATTACTTCCATTTCAATCAACTGCAGCATGTAGGGTGGTGGTCGCCAACGATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAATGTCGTGAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGATGTCAGTAAAATCAATAATATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTTTTTTTGGAAAACGTGAATCCTGAAAATCAGGCCCTTTTGATTTTGATATCTTGCTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTGAAGGAAGCTATATTTTTGGATCTTCTTAGAGTCATTAGACATCACCGAGCTCGACTTGCGACACCAATCCGCACAGTGCAGAAGATGCATAGTGATTCTGACTTGGAAAGCGTTCCATTTTCTGATTCAATATTTGGTCATGGTGGTGCGACTTTGAATCGCCGCATGCTGATGATTGAACCCCCCTACAAAATTTACGGAGATGATAGAAAGCAAAGCCATAGTAGGACATCACGCACAACAACTGGAGAACAAAACAGTAAGCCCATTGCACGGTCGTCGGGTGACAACAAGGCAGCTAAAGAGACAACACCATCTGAAAGAAAGACAGAAGTAAAGACTGGAGAAGGACGAGACTCCGATACAAAAATACATTCCAAAGTTCCGATGTCGACCTCTGAAGATAAACCAAGCAGTGAATCGAAACATAAATCATCATCAAGGTCTGTGTCGAGTACGAGTACGAATGGTATCGCTGATATGCCAACTTCTGATGCCAAAACAACTCCATCAGATGCTGATAATTCAATGCAAGATTCTGGCTCCTCCAAGAAATCCAAAAATAGCTCAGGGAGTAACAACAAGCAGAACTACAAGCCTATCCATTCTTCTGTTTCCTTTCAGGAAGATGTCAAGAAACCAGAAGGAACTACTTCACCAGCTTCACAGCCAAGGATAGAAGGTGATCAGACGACGAATCCATCAACAACAAAGACCGGTGGCGTAGAAGAGAATATAATCCTCGGTGTTGCTTTGGATGGCTCTAAGAGAACACTCCCTATCGAGGACGACACGCCATCTTCCCCTCAAACGACGTTGGGAGCAAAAGATTTAGCTGCTGCATCCCTGAATGGGAACGGGGCGAATGGAGCAACAACTCCCGACAAGGAAACGAAACGACAGTCTCCTCCTACCACATCTTCTATTGAATAA 2280 42.85 MVLVGSLQLSYHLGPWKNHLLEENLKFTSHSNNIRLQNVASPSSLLFQQKNTWSSHLFSLKYPPSYVVPSRYNAFRCHSSLMTNQPLDPSGMKAAIVALTRFCNVLGGCPPPVVKMVPAVSIMIFAVWGLGPFLRYTRSLLHSDSNWKKSQTYKVMTLYLQPLFLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSETSESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTRIEGYEVSGTVEKHVLYEHVRHYFHFNQLQHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQALLILISCFVKTSHFEEYLCVKEAIFLDLLRVIRHHRARLATPIRTVQKMHSDSDLESVPFSDSIFGHGGATLNRRMLMIEPPYKIYGDDRKQSHSRTSRTTTGEQNSKPIARSSGDNKAAKETTPSERKTEVKTGEGRDSDTKIHSKVPMSTSEDKPSSESKHKSSSRSVSSTSTNGIADMPTSDAKTTPSDADNSMQDSGSSKKSKNSSGSNNKQNYKPIHSSVSFQEDVKKPEGTTSPASQPRIEGDQTTNPSTTKTGGVEENIILGVALDGSKRTLPIEDDTPSSPQTTLGAKDLAAASLNGNGANGATTPDKETKRQSPPTTSSIE 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4963208 4971463 + Carg05864-RA Car16g00778 163930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00778 759 MobiDBLite consensus disorder prediction 513 693 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 550 592 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 527 549 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 593 691 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 710 726 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 706 759 - -
Car16g00778 759 MobiDBLite consensus disorder prediction 734 759 - -
Car16g00778 759 Pfam Mechanosensitive ion channel 241 465 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00181 Car-Chr12:1119626 Car16g00778 Car-Chr16:4963208 0 dispersed
Car12g00782 Car-Chr12:7528971 Car16g00778 Car-Chr16:4963208 1.70E-11 dispersed
Car16g00778 Car-Chr16:4963208 Car05g00491 Car-Chr5:2839254 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00778 K22047 - csv:101217250 1112.44