Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car16g00797 | ATGGCTCTGGTCCTGCATTCTTGGAAGGCTAACAAAAATGCTTACAAGGCTTTTATAGCTGCTGAATACAATGGTGTCAAAATTGACCTTTCTCCAGATTTTGTCATGGGCGTAACCAATAAAAGTCCTGAATATCTGAAAATGAATCCTATTGGGAAGGTTCCTGTGTTGGAAACACCCGACGGTGCTATCTTTGAGAGCAATGCTATAGCTCGCTATGATTACTTAGATCGGAAAGCAATGTGTTTGATTTTATTATCATACCGTTCATTCTATTGTTTTCAGGGACATGTTGAACAATGGATCGATTTCTCCACAACGGAAATAGATGCTCATATTTCAACAATTTTGAGGCCTAGATTTGGATATGGTGTTTACCATCCTGCTGTAGAAGAAGCTGCAAACGCTGCCCTAAAACGATCTTTTGCTGCTTTGAACTCTTACCTTGCTTCAAACACATTCCTTGTTGGTCATTCTGTGACACTGGCTGATATCATTTTGACATGCAATCTCTATTTGGGATTTACGTATATATTGACTAAAAGCTTTACTTCCGAGTTCCCTCACGTCGAGAGGTACTTCTGGACGTTGGTCAATCAACCAAATTTCCAAAAGATAATTGGTGAGGTAAAGCAGACTGATGCCATTCCACCAGTGAAAACACCTGAAGAGGCTGCAGCAGCTGCCAAACCAAAGCCTGAGCCCAAGAAACAAGAAGAGAAGCCCAAAGCAGCACCTGCTGCAGAAGAGGAGGCACCAAAGCCGAAGGCCAAAAATCCTCTCGACCTGCTTCCTCCCAGTAAGATGATTTTGGACGAGTGGAAACGTCTCTACTCGAACACTAAAACCAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAAGGATACTCCCTTTGGTTCTGTGATTACAAATACAACGACGAGAACACAGTTTCATTCGTGACTTTGAACAAAGTCAGCGGATTTCTTCAGAGAATGGATCTTGCTCGCAAGTATGCCTTCGGAAAGATGCTCGTGATCGGATCAGAGGCTCCATTCAAGGTGAAGGGGCTATGGCTTTTCCGTGGACAAGAAATCCCGCAATTTGTGATCGATGAATGCTATGATATGGAACTATACGAGTGGAAGAAGGTGGATATCTCGGACGAAGCCCAGAAGGAGAGGGTGAACCAAATGATTGAAGACCAGGAACCATTCGAGGGTGAAGCTCTTTTGGATGCTAAATGCTTCAAGTGA | 1254 | 43.46 | MALVLHSWKANKNAYKAFIAAEYNGVKIDLSPDFVMGVTNKSPEYLKMNPIGKVPVLETPDGAIFESNAIARYDYLDRKAMCLILLSYRSFYCFQGHVEQWIDFSTTEIDAHISTILRPRFGYGVYHPAVEEAANAALKRSFAALNSYLASNTFLVGHSVTLADIILTCNLYLGFTYILTKSFTSEFPHVERYFWTLVNQPNFQKIIGEVKQTDAIPPVKTPEEAAAAAKPKPEPKKQEEKPKAAPAAEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 5228476 | 5231316 | + | Carg25381-RA | Car16g00797 | 163949 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car16g00797 | 417 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 73 | IPR004045 | - | |
Car16g00797 | 417 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 257 | 417 | IPR001662 | GO:0003746|GO:0006414 | |
Car16g00797 | 417 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Car16g00797 | 417 | MobiDBLite | consensus disorder prediction | 221 | 260 | - | - | |
Car16g00797 | 417 | Pfam | Glutathione S-transferase, C-terminal domain | 130 | 201 | IPR004046 | - | |
Car16g00797 | 417 | Pfam | Elongation factor 1 gamma, conserved domain | 256 | 364 | IPR001662 | GO:0003746|GO:0006414 | |
Car16g00797 | 417 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 219 | IPR010987 | - | |
Car16g00797 | 417 | MobiDBLite | consensus disorder prediction | 227 | 257 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00742 | Car-Chr6:5037073 | Car16g00797 | Car-Chr16:5228476 | 0 | dispersed | |
Car16g00797 | Car-Chr16:5228476 | Car12g00363 | Car-Chr12:2329870 | 3.58E-08 | dispersed | |
Car16g00797 | Car-Chr16:5228476 | Car04g00833 | Car-Chr4:4864965 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car16g00797 | K03233 | - | csv:101215571 | 664.455 |