Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00846 ATGAATTGCTTTCAATGTTGTATGTCAGAGGAGAAAGTCAAAAGGAAATCTTCCAAAAAGAGCGTTAAGGAGCATCAGGAGCCAAAAGCTCTATCCTCATTTGCCAACATTTCCTTTAAATCTGATAATAGTCGGCGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCTCTGCTCAAATTTTTTCATTTGGTGAGCTATCTACTGCTACGAATAACTTCAGCCAAGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGCATCCTCGAAGGCACAAACCAAGTAACGGCCGTGAAGCAGCTCGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCTAACCTTGTGAATTTGGTTGGGTATTGTGCTGATGGAGATCAGAGGATTTTGGTTTACGAGTGCATGGCTAACGGTTCCTTGGAGGATCATCTTCTTGATATACCGCCAGATAAGCAGTGTCTGGACTGGAAGACGAGGATGAAAATTGCTGAAGGAGCGGCAAAAGGACTTGAATACTTGCATGAAACCGCCAGTCCGCCCGTGATATACCGTGATTTCAAAGCTTCAAACATATTGTTGGATGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCAACTGGGGATAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATATGCGCTTACGGGACAATTGACAACGAAATCAGATGTCTACAGCTTCGGTGTCGTGTTTCTGGAGATTATAACTGGAAGACGGGTTATAGACAATGCTAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTATTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGAAATTACTCAGTGAAGGCTCTGTATCAAGCTCTAGCAGTAGCAGCCATGTGTTTACAAGAGGAAGCGGGTACTCGACCATTGATCAGCGACGTGGTTACAGCAATCGAATACTTAGCCGCAGACAAGGACATCGATGAAGACATAGATGACGATTCGAATTTGGGACCAGATTCAGGTTCAGGAGAAGGTTCTCCGGATAGAAGTAGGAACGATGGAGATAAAATTGTGGAGGGTGATGGTGATGGTGATGGGAGGTGA 1209 43.34 MNCFQCCMSEEKVKRKSSKKSVKEHQEPKALSSFANISFKSDNSRRRYITEEIKKLGKGNISAQIFSFGELSTATNNFSQENLLGEGGFGRVYKGILEGTNQVTAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYECMANGSLEDHLLDIPPDKQCLDWKTRMKIAEGAAKGLEYLHETASPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGNYSVKALYQALAVAAMCLQEEAGTRPLISDVVTAIEYLAADKDIDEDIDDDSNLGPDSGSGEGSPDRSRNDGDKIVEGDGDGDGR 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6187289 6190918 + Carg24812-RA Car16g00846 163998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00846 402 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00846 402 MobiDBLite consensus disorder prediction 363 402 - -
Car16g00846 402 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Car16g00846 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Car16g00846 402 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00846 402 MobiDBLite consensus disorder prediction 381 402 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01000 Car16g00846 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00846 Car-Chr16:6187289 Car17g01306 Car-Chr17:9830000 3.90E-177 dispersed
Car19g00800 Car-Chr19:8656218 Car16g00846 Car-Chr16:6187289 3.13E-106 dispersed
Car16g00846 Car-Chr16:6187289 Car04g00891 Car-Chr4:5114027 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89446 PF00069 Pkinase 1.20E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00846 - - csv:101212756 674.47