Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00851 ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTCATGGGTCTCACGTCGTTCACCGCCGGAGCTCTCCGGCGCCAATTCGGCCGTTTTCTTGCCCACCTCCATTGCCGGCGCTAAAGCTCCAAGGCTTGGTTCTCTGTATGAAAAATGCCCTTCATATCTCTTCGGTTTCTAATTTCGGGCCACTGAGAACCCGGAAGAGTGATTTGGTTACGAGCAAAGCCTACGAGGCTGACCGATCGCACCCGATTGAGTCGAACGTTGAACTGACGGTAGCCGAAGCGCGAACAGAGGCGGCGAAGAAAGTGAAGATCGGACTCTATTTCGCTCTCTGGTGGGGTTTGAATGTCGTGTTCAACATTTACAACAAGAAGGTTTTGAATGCGTTTCCATATCCATGGCTAACCTCCACGCTTTCCCTCGCTGTTGGCTCGCTCATCATGTTAATCTCTTGGATGACAAGGATCGCCGAGGCACCCACCACCGATTTTGAGTTCTGGAAGTCTTTGTTCCCTGTAGCTGTGGCCCATACGATTGGGCATGTAGCGGCCACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGTGAGCCTGCATTTAGTGTATTGGTTTCAAGGTTCCTGTTGGGTGAGACTTTCCCTGTTCCTGTCTACCTCTCTCTTCTACCGATCATCGGCGGATTCATGGGAGCTATGATATCAAACTTGGCATTTGTGTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGGCTGTTAGCGGGATGAACTACTACGCCTGTTTGTCTATTCTGTCCCTTTTGATTCTTACCCCATTTGCTATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACTGCTGTCTCTCATAATGGACCTAACTTCGTTTGGTGGGTAGCAGCTCAAAGTGTGTTCTATCATCTCTATAACCAAGTATCCTACATGTCTCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGTAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATCATCATCTTCCGCACACCTGTCCAACCCGTCAACGCTCTCGGAGCTGCGATCGCTGTTCTCGGGACCTTCTTATATTCACAGGCAAAACAATGA 1146 48.34 MISSFTQSAKPIHGSHVVHRRSSPAPIRPFSCPPPLPALKLQGLVLCMKNALHISSVSNFGPLRTRKSDLVTSKAYEADRSHPIESNVELTVAEARTEAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAFPYPWLTSTLSLAVGSLIMLISWMTRIAEAPTTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTAVSHNGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6217793 6221196 - Carg24817-RA Car16g00851 164003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00851 381 MobiDBLite consensus disorder prediction 1 20 - -
Car16g00851 381 Pfam Triose-phosphate Transporter family 104 377 IPR004853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00851 Car16g00851 CCT
Car09g00851 Car16g00851 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00473 Car-Chr3:5048716 Car16g00851 Car-Chr16:6217793 1.21E-170 dispersed
Car09g00851 Car-Chr9:5210024 Car16g00851 Car-Chr16:6217793 1.98E-114 dispersed
Car09g00852 Car-Chr9:5211866 Car16g00851 Car-Chr16:6217793 9.98E-51 dispersed
Car16g00851 Car-Chr16:6217793 Car03g01154 Car-Chr3:9215317 4.10E-64 dispersed
Car18g01023 Car-Chr18:10615821 Car16g00851 Car-Chr16:6217793 7.80E-44 dispersed
Car16g00851 Car-Chr16:6217793 Car16g00554 Car-Chr16:3501529 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00851 K15283 - csv:101216838 663.299