Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00854 ATGCAATTTCCAATGCAAGGTTTGATCCACCTTTCCCTCCTTATTTCCCTGCTTCTTTTTTCCCATTTTTCTATCTGTTTCGGACAAGACTACATCATCGGCGACGGCGCCGGTACCATCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGCTGGTGCCGGCGAAGCCGACGCGAAGGGGGCAACACCACCGCCGGAGCAGAACAACTGCAATGGCATATTCTTGTCGTACACTTTCGTTTCGCGTGAGAAGGTGTTTCCCCGACTGAAAAACGTGACGGCTCAGCCATGGGCTTTCAGGTCGGAGGCGATGATTCTAAACGCCGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGCTTTCAAAACCACGAGATCCTGGTGTCAGTCAACGGCGCCGTGGTGATAGACGGGTCGGATTTCCCTGTGATGGTTGGGAATGGAACCACCTTGGCTGGTTACCCAATGACGGATCTGAAAACGTCGATTGAAACCGCCGGCAATATGGATGAGATTCAGGTGAACGTGGAGCTGGTCGGAACGATGTTCGGCATCAAGCCTCCTGGTTTTCCAATGCCTAAGACCATTAACCTTGTTAACGATGGGTACAAGTGCCCTGCGCCTCGCCGTCGCGCACCAGAGAAAACCAAATTTTTTCCTCGCCAAGATGGAGATCTCTCACTAACCTATGATGTAATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTTACAATCGACAACAACAATCCCTTGGGCCGTCTGGATCACTGGAACTTAACATGGGAATGGATGAGAGGAGAGTTCATTCATAGCATGAGAGGAGCATATACTTATACAAGAGATATCTCTCAATGCATTTACGGTCCGACAGGCCAATTCTATCAAGATTTCGACTTCACCGGAGTCACGAGTTGTGATAAGAGGCCAGTGATCGCAGATCTCCCAGTGGAACGAAAGGACGATGACAAGATCGGAAAGTTGCCATATTGTTGTAGGAATGGAAGTTTGTTACCAACAATGATGGATGAAAGCAAAGCCAGGTCTATTTTTCAACTACATGTCTTTAAGCTTCCACCAGACATGAACAGAACAGCTCTTACTCCACCACAGAAATGGAAGATCACCGGCATTCTCAACCCGAAATACGTATGCGGACCACCGCTCCGAGTCGATCCGACCGAGTTTCCAGACCCAAGTGGGCTTCAATCAACAAGTACAGCAGTTGCAAGTTGGCAAGTTGTGTGCAACATTACAAGGCCAAAGATGAAACAATCAAAATGTTGTGTTTCATTTTCAGCATATTATAATGACTCTGTGATTCCTTGCAATACTTGTGCATGTGGGTGTGAAGACATTGATACTGATACTTGCAATCCAAATGCGAAGGCAATGATGCTACCTCCAGAAGCTCTTTTGGTGCCATTTCATAACAGGACAGCCAAGGCAAGAGCTTGGGCTAGAATTAAGCACTACCCAAATCCTAAAAAGTTGCCTTGTCCTGATAACTGTGGTGTTAGCTTGAATTGGCATATTAACTCAGATTATGCCGGTGGATGGACTGCAAGACTAACACTTTTCAACTGGGAAGATTACCCATTTGCGGATTGGTTCACTGCTGTTCGGTTGGACAAGGCCGGCCGTGGCTATGAAAACGTTTATTCCTTCAATGGCACCCTGCTTCCCAACCTCAAGAACACCATCTTCCTTCAAGGCTTGCCTGGTTTAACATACTTGATGGGGGAGGTCAATGGGACTCATCCTGAAGCCGACCCAAGAATTCCAGGGAAGCAGCAATCTGTGATTTCTTTCAACAAGAAGGGCATTCACGACTTCGACATACTACTCGGTGACGGTTTCCCGAATAAGGTTATTTTCAATGGTGAAGAGTGTTCACTTCCGAGTGAAATTCCCTTGGCAAGTTCAGGCCAACACTCCAGCCATGCTCTTATGCCAATCATCTTCGTCTTAGCCATTACTTTCATGCATATCACACATTGCTTACATTGA 2013 47.49 MQFPMQGLIHLSLLISLLLFSHFSICFGQDYIIGDGAGTIGGGGGGGGGGAGAGEADAKGATPPPEQNNCNGIFLSYTFVSREKVFPRLKNVTAQPWAFRSEAMILNAGSTELKAWKMFIGFQNHEILVSVNGAVVIDGSDFPVMVGNGTTLAGYPMTDLKTSIETAGNMDEIQVNVELVGTMFGIKPPGFPMPKTINLVNDGYKCPAPRRRAPEKTKFFPRQDGDLSLTYDVMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIHSMRGAYTYTRDISQCIYGPTGQFYQDFDFTGVTSCDKRPVIADLPVERKDDDKIGKLPYCCRNGSLLPTMMDESKARSIFQLHVFKLPPDMNRTALTPPQKWKITGILNPKYVCGPPLRVDPTEFPDPSGLQSTSTAVASWQVVCNITRPKMKQSKCCVSFSAYYNDSVIPCNTCACGCEDIDTDTCNPNAKAMMLPPEALLVPFHNRTAKARAWARIKHYPNPKKLPCPDNCGVSLNWHINSDYAGGWTARLTLFNWEDYPFADWFTAVRLDKAGRGYENVYSFNGTLLPNLKNTIFLQGLPGLTYLMGEVNGTHPEADPRIPGKQQSVISFNKKGIHDFDILLGDGFPNKVIFNGEECSLPSEIPLASSGQHSSHALMPIIFVLAITFMHITHCLH 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6258208 6260804 - Carg24820-RA Car16g00854 164006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00854 670 MobiDBLite consensus disorder prediction 45 67 - -
Car16g00854 670 Pfam COBRA-like protein 241 420 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00880 Car16g00854 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01315 Car-Chr6:9408958 Car16g00854 Car-Chr16:6258208 0 dispersed
Car14g01416 Car-Chr14:11916014 Car16g00854 Car-Chr16:6258208 1.51E-41 dispersed
Car14g01418 Car-Chr14:11917877 Car16g00854 Car-Chr16:6258208 0 dispersed
Car16g00854 Car-Chr16:6258208 Car10g00270 Car-Chr10:1288557 5.18E-28 dispersed
Car16g00854 Car-Chr16:6258208 Car04g00880 Car-Chr4:5071120 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00854 - - csv:101216608 1097.03