Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00895 ATGTGGGGTCTCACACTATTTTTTCTAAGTCCAAGTTTGTTCTTTCTTGTGGTTTGCAGGTCCGAAAAGGAGATAAATCGACGAAAGGACATGCTTGCTCAGATGAGATCAAAAGTAAACCAGATGGCCTCAACGCTGAACATGTCAAACTTCGCTAACCGCAACAGTTTGCTTGGCCCCGATATGAAATCAGCGGATGTAATGAGCAAAACAGCTGAACTAGACAACCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGTTGGAGGAGACTATAAGAAGTACAAAACATATTGCTTTGGCAGTTAATGAAGAACTCGATCTTCATACTCGCCTAATTGATGACTTAGACCAGCATGTCGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTGGGAATGCTTCTGTCTGTGGTAGGTATTGTGGGTTTAATTGCTGTCATATGGCTACTCATTCGATACTTGTAA 543 42.36 MWGLTLFFLSPSLFFLVVCRSEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLVGFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQKRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7125309 7126953 - Carg22360-RA Car16g00895 164047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00895 180 Coils Coil 94 114 - -
Car16g00895 180 Pfam SNARE domain 121 171 IPR000727 -
Car16g00895 180 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 84 146 IPR000727 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00980 Car16g00895 CCT
Car09g00889 Car16g00895 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00889 Car-Chr9:5458639 Car16g00895 Car-Chr16:7125309 3.14E-27 dispersed
Car16g00895 Car-Chr16:7125309 Car01g00980 Car-Chr1:9324160 2.14E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00895 K08503 - csv:101223140 285.419