Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00901 ATGTCTCTACAAAGATTTGTTGCACTCGAACACCCTCGTCTTGTCGATCGAAAGCTCCTTGCTCGACCTCAACATGAAGGCTTCGGCGCTGTCGTAAGAAGAAGCATCGGCAGGTATGAGCTCAAATACTTTGATCCATTCCTTGTTCTAGACGAGTTCTTTGTGACTGCGCCAGCTGGTTTTCCTGATCATCCACATCGAGGATTTGAAACTGTCACCTACATGCTACAGGGAGCAATGACACACGAAGATTTTCAAGGCCATAAAGGAACAATTGAAGCTGGCGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTCCACTCTGAAATGCCTGCCTCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATAGAGCCGAGGTATCAAGAAGTACATAACAACGACGTAGTGGAAGCTAAAAAAGACGGAGTAAAAGTGAGAGTGATAGCGGGAGAAGCCATGGGAAAACGATCCCCAATTTACACCAAGACTCCGACCATGTACTTGGATTTCACACTCGACCCAGGATCTCACATCGAGCAGCCGATCCCAGTGGGATGGAACGCGTTCGTGTACGTGCTAGAAGGCGAGGACGGAGTGTTCGGGAGCGTGAAATCAATGCCAATTGCATCACATCACATTCTTTTGTTAGGGAATGGGGATGGATTGGAGGCTTGGAACAAGTCTTCCTCTGAAGCCCTAAGGTTTATATTGGTCGGCGGTGAGCCATTGAATGAGAGTGTTGCGCAGATGGGGCCATTTGTGATGAACACTGAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGTACCAATGGGTTTGAGAGAGCAAAGCATTGGAGTTCACAAGCTTAA 891 47.14 MSLQRFVALEHPRLVDRKLLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTAPAGFPDHPHRGFETVTYMLQGAMTHEDFQGHKGTIEAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGKRSPIYTKTPTMYLDFTLDPGSHIEQPIPVGWNAFVYVLEGEDGVFGSVKSMPIASHHILLLGNGDGLEAWNKSSSEALRFILVGGEPLNESVAQMGPFVMNTEEEIDQTIEDFENCTNGFERAKHWSSQA 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7360881 7362290 + Carg22353-RA Car16g00901 164053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00901 296 Pfam Pirin C-terminal cupin domain 178 285 IPR008778 -
Car16g00901 296 Pfam Pirin 32 125 IPR003829 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00892 Car16g00901 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01379 Car-Chr6:9910029 Car16g00901 Car-Chr16:7360881 5.90E-109 dispersed
Car09g00892 Car-Chr9:5505751 Car16g00901 Car-Chr16:7360881 2.89E-113 dispersed
Car16g00901 Car-Chr16:7360881 Car14g01335 Car-Chr14:11283177 3.99E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00901 K06911 - csv:101204082 499.975