Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00906 ATGCCTAGTGTAACGACGGAGTCGTCTGAGAAGGACTCGGAGCCGTTTGTCGAAGTGAATCCAACGGGTCGATACGGGCGATATAGCGAGCTTCTAGGGTCGGGAGCGGTGAAGAAAGTGTACCGAGCGTTTGATCAAGAAGAAGGAATTGAGGTAGCTTGGAATCAAGTGAAATTAAGAAGCTTTTCAAATGATCCATCCATGATTGATAGGCTTTACTCGGAGGTGACATTGCTAAGAACCTTAAAGAACAATAACATCATTGCTTTGTACGATGTATGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACCGAGGTTTGTACAAGTGGGAATCTTAGAGAGTATAGGAAGAAACATAGGCAAGTTTCTTTGAAAGCCTTGAAGAAATGGTGTAAGCAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGAGCCTTGTGTTATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGGCAGGTGAAGATTGGTGATTTGGGTATGGCTGCAACGGTGGGGAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCGGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGCATGTGTTTGCTTGAATTGGTCACCTTGGAAATTCCCTATAGTGAATGTGATAACGTTGCCAAGATCTATAAGAAAGTATGCTCGGGCATCAAGCCGTTGGCGCTCGACAAGGTCAAGGACCTTGAGGTGAAGGCTTTCATTGAGAATTGCCTTGCTCCGTCTCAAGATCGGCCCTCGGCTGCTGACCTCCTCCGCCACCCGTTTTTCAGTGAAATTGACGACGACGACGATGAGGATAGTAATGATCGTTAG 897 44.48 MPSVTTESSEKDSEPFVEVNPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVTLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWCKQILKGLHYLHTHEPCVIHRDLNCSNLFVNGNVGQVKIGDLGMAATVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVCSGIKPLALDKVKDLEVKAFIENCLAPSQDRPSAADLLRHPFFSEIDDDDDEDSNDR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7419118 7420111 - Carg22348-RA Car16g00906 164058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00906 298 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00906 298 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00623 Car-Chr7:3138823 Car16g00906 Car-Chr16:7419118 4.56E-162 dispersed
Car16g00906 Car-Chr16:7419118 Car17g00216 Car-Chr17:1308498 3.38E-123 dispersed
Car06g00715 Car-Chr6:4444370 Car16g00906 Car-Chr16:7419118 0 transposed
Car16g00906 Car-Chr16:7419118 Car20g00574 Car-Chr20:3222624 8.72E-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89447 PF00069 Pkinase 5.20E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00906 K08867 - csv:101221172 530.406