Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00907 ATGGACCCCACTGAACCTGCCTCCACCGCCGCTGCCGGCGCCAAGTACAAGCTCATGTCTCCGGCTAAGCTTCCGATCTTCCGCTCTCCTTGCATTACCATCCCTCCCGGCCTTAGTCCCTCTTCCTTTCTCGACTCTCCTGTTTTGCTTACTAACTTCAAGGTAGAGCCTTCTCCGACAACTGGGTCCTTTACCAAGCTGCCAATGGCACATGACTCTTCTAGCTCGGCTATTTATCCGATGACCACCATGGCTTGCTCAAATGCTAATGCCTCAGATGAAGGAAACTCCAACTACTTCGAGTTCAAGCCATATGTTGGACCAAATATGGTTCCTGCAGATATGAGTCATAGAAAAGATGAACAATCTTGTGAACTTCAAGTTCAAGGCCAACCTCAACCATTTACTTCTCCACCCATGACTAAAAGTGAGATCAATGTCATTTCAAATGATTCGAGTCGATCAACCCAGATGGATCCAGTTGCCTCAGGGGCTGCTGTTCCTGATGTTGATGGAGACGATTTCAATCATAGTCTGAACACAAATACCAGGGCTCAGGCCGCACAATCTGATCCAAAAGGCAGTGGCAGTCCAGTAGTTTCAGATAGGATATCTGATGATGGATATAACTGGCGGAAGTATGGACAGAAGCATGTTAAAGGGAGCGAATTTCCCCGTAGTTATTATAAATGTACACATCCTAACTGTGAAGTGAAAAAGCTCTTTGAGCGCTCTCACGATGGACAAATAACCGATATTGTCTATAAGGGTACTCATGATCATCCTAAGCTTCAGCCAAGTCGGCGATATTCTGCAGGTGCTTCTGTGAAAGATGGTCCTGATAAGCCTTCACCTTTAACTGGCCAAGATGACAGGTCGTGCAGCATATACACTCAGACAGTGCATTCCATTGAGCCAAATGGAACTCCCGAACGACTGGCTGCAAATGATAGCAACACCGAAGGTGCAGGAACAACTCTGCCATGCAAGAATCCTGATGAGCTTGATGACGATGACATAATCTTGAAGCGGAGGAAAATGGAACTTGGTGGTTTTGAGGCATGCCCAATGGTTAGGCCAATTAGGGAACCGCGTGTTGTGGTTCAAACCTTAAGTGAGGTTGATATACTGGATGATGGGTATCGCTGGCGCAAATATGGCCAGAAGGTAGTGAGAGGAAACCCGAACCCAAGGAGTTATTACAAGTGCACAAATGTTGGATGTCCGGTCAGAAAACATGTCGAAAGAGCCTCTCATGACCCAAAAGCTGTTATAACTACATATGAAGGGAAACATAATCACGATGTCCCCACTGCAAAAACTAGTAGCCATGACGCTGCAGGCCCATTGAGAACCGCACCATTGAGGTATAGACTCGAAGACAGGGACACCGTAAGCCTTGATCTTGGCGTTGGCATTGGTGAAAATAGATCAAACGAGTACAGGCAGCAGCCTCTCGCTCCAAATGGCAATTTCAACTTCGAAGTAGTTCAAGAAAACTCAGCCCCAACATATTTCAATGTTCACAATAGAGGTATGAACCAGCATGGACCAAGAGAGAGCTTGAGCGAGAGCCGAAGCGTGGACGTTGTTCCGCTAAACCATTCGTCTCACCCATATCCGCCGAGCGTCGGGAGAATACTAACAGGGCCATAG 1656 47.1 MDPTEPASTAAAGAKYKLMSPAKLPIFRSPCITIPPGLSPSSFLDSPVLLTNFKVEPSPTTGSFTKLPMAHDSSSSAIYPMTTMACSNANASDEGNSNYFEFKPYVGPNMVPADMSHRKDEQSCELQVQGQPQPFTSPPMTKSEINVISNDSSRSTQMDPVASGAAVPDVDGDDFNHSLNTNTRAQAAQSDPKGSGSPVVSDRISDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIVYKGTHDHPKLQPSRRYSAGASVKDGPDKPSPLTGQDDRSCSIYTQTVHSIEPNGTPERLAANDSNTEGAGTTLPCKNPDELDDDDIILKRRKMELGGFEACPMVRPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHDAAGPLRTAPLRYRLEDRDTVSLDLGVGIGENRSNEYRQQPLAPNGNFNFEVVQENSAPTYFNVHNRGMNQHGPRESLSESRSVDVVPLNHSSHPYPPSVGRILTGP 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7429862 7434581 + Carg22347-RA Car16g00907 164059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00907 551 MobiDBLite consensus disorder prediction 513 532 - -
Car16g00907 551 MobiDBLite consensus disorder prediction 150 209 - -
Car16g00907 551 Pfam WRKY DNA -binding domain 378 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car16g00907 551 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car16g00907 551 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car16g00907 551 MobiDBLite consensus disorder prediction 256 334 - -
Car16g00907 551 MobiDBLite consensus disorder prediction 288 326 - -
Car16g00907 551 MobiDBLite consensus disorder prediction 513 551 - -
Car16g00907 551 MobiDBLite consensus disorder prediction 175 196 - -
Car16g00907 551 ProSiteProfiles WRKY domain profile. 200 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01463 Car-Chr11:11830526 Car16g00907 Car-Chr16:7429862 3.08E-13 dispersed
Car16g00907 Car-Chr16:7429862 Car16g00952 Car-Chr16:7891861 6.97E-14 dispersed
Car16g00907 Car-Chr16:7429862 Car06g00588 Car-Chr6:3389291 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4977 PF03106 WRKY 3.10E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00907 - - bhj:120090463 962.6