Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00908 ATGCAGGAATCGTCAAGAAAGAAACTTCCGAACCAATCTCATAGGTTCTACGAACAGCCACCGCAAGAACCTGGGTCGTGTTACTGGCCTCCTATGAACCATGGAGGTGGCTTGTACTCTGATGATGTATTCGAACAAAATCACTTACCATCTGAGGCTTTCAAACAGTACTGCAACCTCGAGTCATCCTCGGGAACTAGTGGTTACCCTCCTCAAAATTCTTCCTCGACTGCTAGCTTCACGTCGAATGGAAGCCCTTCTTCACACCAAGAGTGCCATTCGTACTCGTTAGACCCGTATTATTCTCCCGACAATAACTGTGGTTCACCTGTCAGTAGATCTTGTTTAACAGATGATGCTGCCGATGACTTAAGGCACAAAATCAGGGAATTGGAGACTGCAATGCTTGGACCAGATACCGATGGGTTTGACATCTACTCGGTCGCTAATCCAGTCGATCCTGTATTGCCTGTGCAAGCAGGGTGGAAAGATGTGGCTGAGATAATGTCGAGAAAGGATTTGAAAGAGATGCTTTGTGCTTGTGCACGAGCAATAGGGGAAAACGATATGTTGACTGGTGAATGGTTGGTGTCGGAGCTACGTGGAATGGTCTCGGTTTCGGGTGAGCCAATCCAGCGTTTAGGAGCTTACTTGTTAGAGGCACTTATTGCAAGGACAGCCTCTTCAGGCAATTCTATCTGCAAAGCCTTAAGATGTAAAGAGCCTATAGGTACTGAGATGCTCTCATACATGCACATTCTCTATGAAATTTGCCCTTATTTCAAGTTTGGATACCTTTCAGCAAATGGGGCAATTGCTGAAGCCATTAAAGGTGAAAATAGAGTTCACATAATTGATTTCCAGATAGCACAGGGAAATCAATGGATTACATTGATGCAAGCTCTTGCAAATCGACCCGGAGGACCCCCGAAGGTTACCATTACAGGCATAGATGATTCCGCTTCTGCTTTTGCTCGAGGAGGAGGGCTCGAGATTGTCGGGAAAAGGTTGTCGCTTTTGGCGGAGTCGTTAATGGTACCCTTTGAGTTTCGTGGAATTGCAGGCTCTGCTGATGAAATTCAACGCGAAGATCTTAAAGTTCAACCAGGTGAAGCCATTGCTGTGAGTTTTACCTTGGTGCTGCATCATATGCCCGACGAAAGCGTTGGCAGTCAGAATCACCGGGATCGAATCTTGCGGCTGGTCAAGAGCTTGTCTCCCAAAGTTGTGACAGTCGTCGAGCACGAGTCGAACAACAATACAGCTCCCTTTTATTCCCGTTTCCTCCAGACATTAAAATATTACACAGCTATCTTCGAATCCATAGATGTTACCCTCCCAAGAGATCACAAGGAGCGAATCAACGTGGAGCAGCACTGTTTAGCTCGCGACATCGTAAACATAGTAGCCTGTGAAGGAGCCGAAAGAGTCGAACGTCATGAACTTCTCGGAAAATGGAGATCACGGTTCCTCATGGCGGGGTTTAAGCCACACCCTTTAAGCCCTTTTGTCAATGCTACCATTGAGGCACTGCTAAAGAATTACAGTGACAAGTACACGCTTGAAGAAAGGGATGGGGCTCTATATCTCGGCTGGTTGAATCAAAATTTGGTTACCTCTAGTGCTTGGATATGA 1635 46.3 MQESSRKKLPNQSHRFYEQPPQEPGSCYWPPMNHGGGLYSDDVFEQNHLPSEAFKQYCNLESSSGTSGYPPQNSSSTASFTSNGSPSSHQECHSYSLDPYYSPDNNCGSPVSRSCLTDDAADDLRHKIRELETAMLGPDTDGFDIYSVANPVDPVLPVQAGWKDVAEIMSRKDLKEMLCACARAIGENDMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALIARTASSGNSICKALRCKEPIGTEMLSYMHILYEICPYFKFGYLSANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSASAFARGGGLEIVGKRLSLLAESLMVPFEFRGIAGSADEIQREDLKVQPGEAIAVSFTLVLHHMPDESVGSQNHRDRILRLVKSLSPKVVTVVEHESNNNTAPFYSRFLQTLKYYTAIFESIDVTLPRDHKERINVEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFKPHPLSPFVNATIEALLKNYSDKYTLEERDGALYLGWLNQNLVTSSAWI 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7434890 7436524 - Carg22346-RA Car16g00908 164060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00908 544 MobiDBLite consensus disorder prediction 1 32 - -
Car16g00908 544 Pfam GRAS domain family 175 543 IPR005202 -
Car16g00908 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Car16g00908 544 MobiDBLite consensus disorder prediction 62 92 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00589 Car16g00908 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00624 Car-Chr7:3142947 Car16g00908 Car-Chr16:7434890 0 dispersed
Car09g00833 Car-Chr9:5076543 Car16g00908 Car-Chr16:7434890 1.63E-172 dispersed
Car16g00908 Car-Chr16:7434890 Car20g00575 Car-Chr20:3226120 0 wgd
Car16g00908 Car-Chr16:7434890 Car06g00589 Car-Chr6:3394239 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4978 PF03514 GRAS 2.50E-128 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00908 - - csv:101220072 983.4