Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00925 ATGACCTCAAGAAATCTCCTCGCCGTCGCCCTTTTCCTCCTCCTCTTCACTCCGCCAAGAACACAGAGTATCGGCTTCGATTTCAATTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACTTCCGCGACGGCGTTATCGGCCTCACCAAAGAGCTCGGAGTCCCTTCCTCCAGCGCCGGCGCTGTAATTTACAATCAACCCATCGGATTATACGACGCCGATACCAACATTACTGCCTCTTTCTCCACAAGATTCTCTTTCTCCATCACTAATACTAACCCCACTTTCTCCGGCGACGGTCTTTCCTTTTTCCTCTCCCCTGATAATCGGACCCTCGGTAGTCCCGGTGGGTATTTGGGCCTCGTCAATTCCTCCCGTTTGGTTAACAAGTTTGTCGCGGTTGAATTCGACACTCGGCTTGATTCTGTCTTCAATGATCCTAATGATCACCATGTTGGCTTCGACATTGAAAGCTTGGTTTCAATCAAGACGGCCGATCCTGCTTCTCAAGAGCTCAATCTCAAGAGTGGGGAGTCCATTACGGCTTGGATTGAGTACAAGAATGAGGAGTGTAGGTTGAGGGTTTTCTTGAGTAATTCTAGTTTGAAGCCTTCCGAGGCGCTTCTCGACGTTAACGTCGATCTTTCGAGCTATCTTAAGGAGGTTATGTATGTCGGGTTTTCGGGTTCGACTGAAGGGAGTACTGATCTTTATTTGATTGAGAGTTGGAGCTTTCATACTTCTGGGTTTGTTCCTGCTCGACGTCGGTTTAAGCCTCATAATGTTTCTGATAGCTCTGTGATTGATTCTCCTAATATTTCTATATCTGATTCTGGAAATGGTCATCACAGTCGGCTCGGGCTGGGTCTCGGGATCGCTGGACCGGCCTTCTTTTGTGCCGTGATTGCTGTGTTTGGTTTCTTTTCACTTAGGAAATGGAGAAAGATTAGGACTCAGAAGAGCTTCAAGGCAGAGCTTTTGACAGGTCCTAGGGAGTTTAGTTACAGAGAACTAAAGAGAGCCACAAAAGGATTTCACTCCAGTAGGATCATTGGCAATGGGGCTTTTGGGACTGTCTATAAGGCTTTTTGCACCTCATCAGGAGGCATTTCAGCCGTTAAAAGATCGAAGCATTCCCACGAAGGAAAGACCGAGTTTCTGGCCGAGTTGACGATCATAGCTCGGTTGAGGCACAAAAATTTAGTTCAGCTCCAAGGTTGGTGCGTCGAGAAAGGTGAACTGCTTCTCGTTTACGAATTTATGCTGAATGGGAGCCTTGATAAGCTGCTTTACCAGGAATCTGTAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAACATTGCTGTTGGATTGGCCTCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAGGTGATTCACAGAGATATAAAGACTGGTAATGTACTTCTGGATGCGAACTTCAATGCCAGACTGGGCGATTTTGGATTGGCAAAGCTCATGGATCACGACAAGAGCCCGGTTTCAACTCTAACCGCAGGAACAATGGGATACCTCGCACCTGAGTATCTACAATACGGGAAAGCGACTGAGAAAACCGATGTCTTCAGCTATGGTGTGGTTATGCTTGAAGTGGCCTGTGGGAGGAGGCCGATCGAAAGAGAAGCAGGTACTCAAAAGATGGTCAATCTGGTAGACTGGGTTTGGGGATTACATTCTCAGGGAAAGATCATCGAAGCAGCCGATAAAAGGTTGAATGGTGAGTTCAAGGAAGAAGAAATGAGGAAACTGTTACTTGTTGGATTGAGCTGTGCAAACCCGGATAGCTCGGTCAGGCCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGACGGAGCCGGTGTTCGTGCCAAAACTGAAGCCTAGTCTTACCTTTTCTTGTGGCTTTTCACTGACCGTGGATGACATTATAGTAGAGGAAGGAGGAGGAGAGTGGGAATCTGCAAAGGCAACCACTATCCAAATAGACTGA 2010 47.11 MTSRNLLAVALFLLLFTPPRTQSIGFDFNSFNIRNLTLLGDSHFRDGVIGLTKELGVPSSSAGAVIYNQPIGLYDADTNITASFSTRFSFSITNTNPTFSGDGLSFFLSPDNRTLGSPGGYLGLVNSSRLVNKFVAVEFDTRLDSVFNDPNDHHVGFDIESLVSIKTADPASQELNLKSGESITAWIEYKNEECRLRVFLSNSSLKPSEALLDVNVDLSSYLKEVMYVGFSGSTEGSTDLYLIESWSFHTSGFVPARRRFKPHNVSDSSVIDSPNISISDSGNGHHSRLGLGLGIAGPAFFCAVIAVFGFFSLRKWRKIRTQKSFKAELLTGPREFSYRELKRATKGFHSSRIIGNGAFGTVYKAFCTSSGGISAVKRSKHSHEGKTEFLAELTIIARLRHKNLVQLQGWCVEKGELLLVYEFMLNGSLDKLLYQESVEASLLNWSHRYNIAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDANFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVMLEVACGRRPIEREAGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFKEEEMRKLLLVGLSCANPDSSVRPSMRKVLQILNNETEPVFVPKLKPSLTFSCGFSLTVDDIIVEEGGGEWESAKATTIQID 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7586734 7588743 - Carg22329-RA Car16g00925 164077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00925 669 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246
Car16g00925 669 ProSiteProfiles Protein kinase domain profile. 348 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00925 669 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Car16g00925 669 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Car16g00925 669 Pfam Protein kinase domain 348 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00925 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02346 Car-Chr4:18854041 Car16g00925 Car-Chr16:7586734 2.67E-149 dispersed
Car07g01020 Car-Chr7:5881292 Car16g00925 Car-Chr16:7586734 1.97E-15 dispersed
Car11g01453 Car-Chr11:11777866 Car16g00925 Car-Chr16:7586734 5.20E-129 dispersed
Car14g00178 Car-Chr14:839291 Car16g00925 Car-Chr16:7586734 7.60E-139 dispersed
Car15g00564 Car-Chr15:3132758 Car16g00925 Car-Chr16:7586734 2.00E-145 dispersed
Car16g00925 Car-Chr16:7586734 Car14g00101 Car-Chr14:517786 1.89E-140 dispersed
Car16g00925 Car-Chr16:7586734 Car06g00317 Car-Chr6:1745449 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89448 PF00069 Pkinase 8.80E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00925 - - csv:101209797 1187.94