Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00958 ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCATTTGAGAAGTGAAGTAGTACAGTCGCCGTTTCAAGCTTGCCTTTTGCAGTTTCCCCCTTCAATGAGCGCACAGAGATTGGATTTGCCCTGCAGCTTTTCCCGCTCGAAAGACGCCTCTTCCGTCGCTCGATCCCCATCGATCCGCCCGGTTTCTCTCTCGGTCGAGAAGCAGGACATTAGGCTTCCGCCGCTATCCGCTACTAACCAGAAAATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGATTGATGATGATGAATCTTCCATTAGCAATGCCAAGAGGAAGAGAGCGTGCAGAGATGACGTAGGAGACGGGCTAATTCTGAGCCAATTCGGCGGTGGGGTTCGGAGTTTCTGGTATCATCAACAGCCTGATGGAGATGAAGGACTCTGCTTTCTTCCTGGAAGTTCAACGTCCCCGTTTATGTCGGAGATTGCTGATTTGGGAGAAGGAAATGACGGAGAAAGCAGCCATGTGAAGGCGCAGGACGGCTCGGACTCAGTCTCCGGTTCAGATTCGGGGTCGAGTTCATCATCAAGAAGTGAGAGATTTGCAGCAGCAGAAGCAGGGCCAGAAATTGGAAATGGGAGCTCAAGAAATCCTTCATATCATCACCATCAAGGCTCTGGCTTAGCAAATGAGAGAGGAGAAGAAGAATCATTTGAGCTGTTAAGTGTTCTAATGGCATGTGTGGAAGCAATAAGATCAAAGAACATTACTTTGATTAACCATCTGATAGAAAAGCTTGGGAGCCAAGCTTCACCAAGAGGTTCATCACCCATTACACGTTTGATTGCATATTACACAGAGGCTTTAGCAGTAAGAGTGAGCAGAGTTTGGCCACAGGTGTTTCACGTAAGGCCGCCGAGGGAATACGATCGGATCGACGACGATACAGGAACAGCGTTACGGCTTCTAAACGAGGTGAGTCCGATTCCGAAATTCATCTACTTCACAGCAAATGAGATGTTGCTGAGAGCATTTGAAGGGAAAGACAAGGTTCACATCATAGACTTTGACATAAAGCAAGGGCTGCAATGGCCGAGCTTGTTTCAGAGTTTGGCATCTAGAGCGAACCCTCCGAGTCATGTCCGAATCACCGGGATTGGTGAATCAAAGCAGGAATTGAACGAAACGGGAGATAGGCTGGCGGGGTTCGCTGAGGCATTGAGGCTGCCGTTCGAGTTTCACGCCGTGGTGGACCGGTTGGAGGATGTGAGACTATGGATGCTTCATGTCAAGGAGAATGAGAGTGTAGGAGTGAATTGCATTCTCCAACTGCACAAGACTCTGTATGATAATAACATCAATGGTGGCGGGGGAGCATTGAAGGACTTTTTGGGGCTTATCAGAAGCACGAACCCGAGCATTGTTGTGATGGCCGAGCAAGAAGCCGAGCACAACAACCTGAGATTGGAGACTCGAGTTGCAGCCACACTTAAGTACTATGGTGCCATATTCGACTCCCTCGACACTAGCCTTCCACCGGACAGCTCGGGGAGGTTGAAAATCGAGGAGATGTTTGGGAGGGAGATAAGGAACATGATAGGATGTGAAGGAAGGGAGAGGTATGAAAGGCACGTTGGATTTGAGAAATGGAAGAAAGTGATGGAGAAGCAAGGAGGGCTGCGATGCGTCGAGATTCGAGACGATCGGGAGCTTCTTCAGAGCCAAATCCTGTTGAAAATGTACTCATCAGCTGATGGATTCAAAGTGAAAAAGATCGAAGGAGAAGGAGGAGCTCAAGCAGTTTGCTTAGCTTGGGAAGAACAGCCACTTTACAGTGTGTCAGGATGGACAGTAGCAGAAGTTTCTTGA 1896 48.42 MLAGCSSSTLLSPRNHLRSEVVQSPFQACLLQFPPSMSAQRLDLPCSFSRSKDASSVARSPSIRPVSLSVEKQDIRLPPLSATNQKIKQEFWNGKGKNLKRIAEQVGIDDDESSISNAKRKRACRDDVGDGLILSQFGGGVRSFWYHQQPDGDEGLCFLPGSSTSPFMSEIADLGEGNDGESSHVKAQDGSDSVSGSDSGSSSSSRSERFAAAEAGPEIGNGSSRNPSYHHHQGSGLANERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHVRPPREYDRIDDDTGTALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPSIVVMAEQEAEHNNLRLETRVAATLKYYGAIFDSLDTSLPPDSSGRLKIEEMFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVEIRDDRELLQSQILLKMYSSADGFKVKKIEGEGGAQAVCLAWEEQPLYSVSGWTVAEVS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7993289 7995184 - Carg25225-RA Car16g00958 164110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00958 631 Pfam GRAS domain family 250 626 IPR005202 -
Car16g00958 631 MobiDBLite consensus disorder prediction 168 240 - -
Car16g00958 631 MobiDBLite consensus disorder prediction 187 209 - -
Car16g00958 631 ProSiteProfiles GRAS family profile. 240 626 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00958 Car-Chr16:7993289 Car04g02872 Car-Chr4:21709645 2.36E-76 dispersed
Car16g00958 Car-Chr16:7993289 Car06g00630 Car-Chr6:3687029 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4982 PF03514 GRAS 4.50E-120 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00958 - - cmo:103490990 979.548