Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00968 ATGTGGCTTCTTTTGATTGGAGCTATTGTTGTTGTAAGTTTTACACACTGGCTTTATAGATGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTTCCTCTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCGTCAGAAACAGAATGGATAGGTATGGACCGATATTCCGAACGAGTTTGGTGGGAAGACCGTTGATTGTCTCAACAGACCCTGACTTGAATTACTATATCTTTCAAGAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGGCAAAATGTTGGTTCGCTGCACGGTTTCATGTATAAATATCTTAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACTCAAAGATTGAGACAATGGTCATCTCAAAACTCAGTTGAATTGAAGGATAATACTGCAAGTATGATTTTTCATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGAGAGAACTTTGTTGCATTCATACAGGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGTCGGAAAAGAGCGATGAGTATGCTGAAGAACATGTTACAAGAAAGGCGAGCAAATCCAAGGAAACAACAAATAGATTTTTTTGATTTTGTTCTTGAAGAACTGGAGAAAGATGGAACTCTTCTCACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTCGAGGAGCTGACGGCTGAACATGAGGGAATATTGAGGAGAAGGGAAAATGCACATTCTGGGCTTACTTGGGAGGAATACAAATCCATGACATTCACATTTCAGTTTATCAACGAAACGGCGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAAGCACTTAGAGATATCCAGTTTAAGGGATATACCATTCCAGCAGGCTGGGCTGTTATGGTCTGCCCTCCAGCTGTGCACTTAAACCCGGAAAAGTACATCGATCCCCTTGCTTTTAACCCGTGGCGATGGGAGAAATCTGAACTGAAGGGAGCTTCTAAACATTTCATGGCTTTTGGTGGGGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTTCAAATGGCT 1290 41.16 MWLLLIGAIVVVSFTHWLYRWRNPKCNGKLPPGSMGFPLLGETLQFFAPNTSSDIPPFVRNRMDRYGPIFRTSLVGRPLIVSTDPDLNYYIFQEEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATQRLRQWSSQNSVELKDNTASMIFHLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMSMLKNMLQERRANPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILRRRENAHSGLTWEEYKSMTFTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPEKYIDPLAFNPWRWEKSELKGASKHFMAFGGGMRFCVGTDFTKVQMA 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8080801 8083321 + Carg25215-RA Car16g00968 164120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00968 430 Pfam Cytochrome P450 31 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00968 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00640 Car-Chr6:3793634 Car16g00968 Car-Chr16:8080801 0 dispersed
Car16g00968 Car-Chr16:8080801 Car04g01049 Car-Chr4:6014161 6.20E-84 dispersed
Car16g00968 Car-Chr16:8080801 Car16g00973 Car-Chr16:8107172 0 proximal
Car04g00725 Car-Chr4:4201944 Car16g00968 Car-Chr16:8080801 1.43E-77 transposed
Car08g00027 Car-Chr8:132655 Car16g00968 Car-Chr16:8080801 6.64E-146 transposed
Car14g00966 Car-Chr14:6051682 Car16g00968 Car-Chr16:8080801 5.30E-149 transposed
Car18g00107 Car-Chr18:581199 Car16g00968 Car-Chr16:8080801 1.43E-127 transposed
Car16g00968 Car-Chr16:8080801 Car06g00639 Car-Chr6:3768994 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00968 - - csv:101209473 817.379