Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00986 ATGGAGGGAGGAGAAGGGGATGCCGGAAATGGGGCTACTGCAGCTGCAGGATCAAGTCCTCCGAGACCTGAGATGGCAGCTCCGGCACCGGAAGGTGGCGGTCCGGTGAGTTCTGCGGCGGCGGTGGCGGGGAAGAAGAAGAGGGGAAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGCGGCGGCGCTGTCGCCGAAGCCGATATCGACGTCGGCACCTGCACGGTCGGCGGTGATTGATTTCTCGGCGGAGAAACGTGGGAAAGTGCGGCCGGCGAGTTCGTTGAGCAAAACCAAATATGAAACGGAGAATTTAGGTGAATGGGTACCTTGTTCAGTAGGAGCTAATTTCACACCCCATATCATCACTGTCAACACTGGTGAGGACGTTACGATGAAGGTTCTCTCATTTTCTCAACAAGGACCTCGAGCCATTTGTATTCTCTCTGCTAACGGTGTGATTTCGAGCGTCACTCTTCGTCAACCCGATTCTTCTGGAGGAACATTAACATATGAGGGTCGTTTTGAGATACTGTCGTTGTCGGGATCGTTCATGCCGAGCGATAATGCGGGAACAAAGAGTAGAACTGGTGGAATGAGTGTCTCGTTAGCGAGTCCAGACGGACGCATTGTTGGTGGCGGAGTTGTTGGTTTGTTAGTAGCTGCAAGTCCGGTTCAAGTGGTAGTAGGAAGCTTTATATTTGGGAACCAACACGAGCAAAAGCCGAAGAAGCCGAAACAAGATGTTATATTACCGGTTTCCGTTTTTCCAATTTCGAGTGTTGAACCGAAATCATACATGACAACAACGACAACGACGACGACAACATCTTCCCTTCGTGCTGAAACGTGGTCACCTTTAGTTCCAGATTTGAAGAGTCAACCAACTGATATCAATGTACCGATAACTAGTGGTTAA 924 50.65 MEGGEGDAGNGATAAAGSSPPRPEMAAPAPEGGGPVSSAAAVAGKKKRGRPRKYGPDGKLNAAALSPKPISTSAPARSAVIDFSAEKRGKVRPASSLSKTKYETENLGEWVPCSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNAGTKSRTGGMSVSLASPDGRIVGGGVVGLLVAASPVQVVVGSFIFGNQHEQKPKKPKQDVILPVSVFPISSVEPKSYMTTTTTTTTTSSLRAETWSPLVPDLKSQPTDINVPITSG 307
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 8368895 8370987 + Carg25284-RA Car16g00986 164138
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car16g00986 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 238 - -
Car16g00986 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 234 IPR005175 -
Car16g00986 307 ProSiteProfiles PPC domain profile profile. 116 261 IPR005175 -
Car16g00986 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 304 IPR039605 GO:0003680
Car16g00986 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 31 304 - -
Car16g00986 307 MobiDBLite consensus disorder prediction 1 76 - -
Car16g00986 307 Gene3D - 121 249 - -
Car16g00986 307 CDD DUF296 120 234 IPR005175 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car15g01061 Car16g00986 CCT
Car15g01061 Car16g00986 ECH
Car06g00971 Car16g00986 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00971 Car-Chr6:7448183 Car16g00986 Car-Chr16:8368895 1.14E-87 dispersed
Car14g01784 Car-Chr14:13966301 Car16g00986 Car-Chr16:8368895 1.18E-87 dispersed
Car16g00986 Car-Chr16:8368895 Car18g01102 Car-Chr18:11045895 2.92E-76 dispersed
Car15g01061 Car-Chr15:8352036 Car16g00986 Car-Chr16:8368895 8.31E-125 wgd
Car16g00986 Car-Chr16:8368895 Car02g01272 Car-Chr2:8526097 8.24E-129 wgd
Car16g00986 Car-Chr16:8368895 Car06g00668 Car-Chr6:3979908 8.69E-152 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00986 - - csv:101205374 442.965