Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01017 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTTAAGCCGGAGACTCGACCCGCCGCCCTTCCAGCCGACAATTCCGACCTCCTCTTCTCTGCCTCCGAGCCTCTCGATGAAACCCTAGGCCATTCCTTCTGTTACGTCCGCTCTTCCAACCGCTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCGCTTCGTTTTTCGCCTCCTCACGAACCGCTGCCTCTCGGGACTAGGACTAGAACTGGCCTGCCGGAGACTGCCTTCAAGGCCATCTCCGGTGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTTTTATGGTCGATAGTGTTTACGACGATGCCACTGACACTGCGCTTGGGGCTTGTGGTAGTGGGTGTGGAGTGAGAGGGAGTATTTTGAATGGCTTTGAGAGTACATCTTCTTTTACTGCTCTTCCGCTTCAGCCGGTGCCGAGAGGTGGGACCGAACCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCACTGTCTGGTCCTCTCGATGCGAATGTTGATGGTGGTGGTGGTGGAGGCGCCGGTGGTGGCAGTGGCGGTGCTGGGAGAGTTCATTTCTCCGCTCCGCTGGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGGCCGTGGGTTGTGCCGGTGTTGAATTTCGTTGGCCGAAAGGATAGCTCGACGGCGGGAGATGAGCCGGAGTTGAGGAATGAGAGTGATGTTCAATGGGCGCTTGGGAAGGCTGGGGAGGATCGGGTACATGTGGTTGTATCAGAAGAGCAAGGGTGGTTGTTTGTGGGGATTTACGATGGATTCAATGGCCCTGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGATGATAATGAGGAGGCTGCTAATTCCAACCCTTCAAACATTGCTGAAGAGAGTACAGTCAGTGTGAATGAAACTAATGCTGACCCGTCTTCCAGAGCCTCTAGTCAAAGGATTGAAACTAATGGAAATGAAGCGGAAGTGGAACCACCGGCTACTGATCGAGGATCGGTCAAGAGGGTTACATTTCAATCCGAGGTTGGATCGGAGAACAGGCGGAGGCGGCGGTTATGGGAGTATTTAGCAGAGGACGATACACAGGATGGACTTGATCTTTCGGGGTCGGAGAGATTTGCATTTTCAGTCGACGATGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGCTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTAATGTTAAGACTTTGTTCCCATGGAAGTATGGTTTGGGAGATAAGGAGAAGGCTGAGGCTGAGAATAGGGTGGAAGAGACATCTTATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCACTGTCACGAGCTCTTGAGATAACTGAATTAGCATACTTGGATATGACAGATAAGTTGCTTGATACCAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTACTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATTTGGGTGATAGCCGTGCCATTGTTGCACAGTATGAGCAACAAAAAGTTGGCCCCAGTGAAGACATGAAGGAGGAGGGCGACAAAGGGACGGGCATGGAGGGTATAATTGAGGAGTCTACAACGAGCGAAGGGAAAATAACTCGAACGAATCAACCTTCGGCTCAGACCACGAGATTGACTGCATTGCAGCTATCCACCGATCATAGCACGAGCATTGAAGAACCAAAATTAAATGATGTCTTACTGGAAATGTTTCGGAACGAGTATATTGGTACGGCGCCATATTTATCATGCTTACCTTCTCTTCGTCACCATAAACTCTGCCCCACTGATCAATTCATCGTGCTTTCATCTGATGGGCTATATCAATATCTAACCAATGAAGAAGTAGTTTCCTATGTTGAGAACTTCATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGACTTTCATGAATTGTTGGACATCCCACAGGGGGATCGGAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2289 48.58 MGSGVSSLFSCLKPETRPAALPADNSDLLFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPLPLGTRTRTGLPETAFKAISGASVSANSSIPRSVFMVDSVYDDATDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGGGGGGAGGGSGGAGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKDSSTAGDEPELRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAANSNPSNIAEESTVSVNETNADPSSRASSQRIETNGNEAEVEPPATDRGSVKRVTFQSEVGSENRRRRRLWEYLAEDDTQDGLDLSGSERFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGNVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQKVGPSEDMKEEGDKGTGMEGIIEESTTSEGKITRTNQPSAQTTRLTALQLSTDHSTSIEEPKLNDVLLEMFRNEYIGTAPYLSCLPSLRHHKLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8658307 8663459 - Carg23221-RA Car16g01017 164169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01017 762 MobiDBLite consensus disorder prediction 337 394 - -
Car16g01017 762 Pfam Protein phosphatase 2C 651 715 IPR001932 -
Car16g01017 762 MobiDBLite consensus disorder prediction 337 372 - -
Car16g01017 762 ProSiteProfiles PPM-type phosphatase domain profile. 265 750 IPR001932 -
Car16g01017 762 MobiDBLite consensus disorder prediction 65 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00580 Car-Chr2:4427611 Car16g01017 Car-Chr16:8658307 5.73E-146 dispersed
Car07g00975 Car-Chr7:5534797 Car16g01017 Car-Chr16:8658307 1.55E-41 dispersed
Car16g01017 Car-Chr16:8658307 Car20g00353 Car-Chr20:1990725 3.32E-48 dispersed
Car16g01017 Car-Chr16:8658307 Car05g01021 Car-Chr5:9756454 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01017 - - bhj:120092087 1376.3