Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01057 ATGTATATTGAGAAATTGAAGGAAGAGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGTATTATCGTTAGTAATTTGGAGAGCCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTATTGGAGTTGGGGCTCGTGTTCTTTTCTACCCAACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGATGGTGGGACAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCGTTCCCTGCGGATGTTCCCTGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACCTTGGTTCCTTCGACTCTATATCTTGATCATGGAATTGATCATCTGACCATTCCAACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGTGTTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACTTATGTTCATTGTAAAGCTGGACGCGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTGCAATACAAGCAAATGACGCCAGAAGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGCTGTCCTGGAATTCTACCGCCTGATTGTGCAGAAGGATGCTTCCTTCTGCCACATAGATGATTTAGGAAAGAAAGTATCAGAATCAGCGCATGATCTTATTACATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACGAAAGTAGCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGATTCTCTTGTTTGTTGCTCAGCTATCGAGCAAAACACCATAGCCAGGAGATTAAAGGAGATGATCCAGGCGTCACGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATTCATGTCTATTAA 1002 42.81 MYIEKLKEEELQSGEEGNSGIIVSNLESQSIVRSDVKRIVIGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPCLKEVGVRGVITLNEPYETLVPSTLYLDHGIDHLTIPTRDYCFAPLLSDICVAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPEEAYKHVKSIRPRVLLAPSQWQAVLEFYRLIVQKDASFCHIDDLGKKVSESAHDLITFDDSSVVVVKESDLDGYDESSSQSEMGDIWADLSVVCRVRVAGQAALTRFSCLLLSYRAKHHSQEIKGDDPGVTKGCSLSATHLEGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9093168 9096605 - Carg24866-RA Car16g01057 164209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01057 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Car16g01057 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Car16g01057 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Car16g01057 333 Pfam Dual specificity phosphatase, catalytic domain 89 211 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01293 Car-Chr5:11911778 Car16g01057 Car-Chr16:9093168 2.79E-96 dispersed
Car12g01250 Car-Chr12:11791497 Car16g01057 Car-Chr16:9093168 1.55E-100 dispersed
Car16g01057 Car-Chr16:9093168 Car08g01045 Car-Chr8:7135371 5.46E-07 dispersed
Car16g01057 Car-Chr16:9093168 Car05g00972 Car-Chr5:9270867 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01057 - - cmax:111465056 651.744