Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01092 ATGGATTCACGAGAGAGGTCGATGCCCTCTGTTCATCAACATCACCAACAATCAACTCCACCAAACAGGATGATGGGCAACGCTTCCTATTCCACAAATTTACCCAATACCAACAATTCTTCCCAAATGATCAACCCCAATTCCGCCGCCGCTCAAATCATGTCCTCCGCCTCCCGATTTCCCTTCAACTCCATGATGGGGTCCGCTTCTAAGCCCTCCGACTCTCCCAATACGGCTTCTTATGATGGATCGCATTCCGAATTGCGGACTGGTGGGTTTAACATTGATTCCGGGAAGAAGAAGCGAGGCCGACCCAGAAAGTATTCCCCTGATGGGAATATCGCCTTGGGTTTAGCGCCAACAACCATCACTAATTCCGCCGTTCCCGGCGATTCTTCCGGCATGAACTCCTCGGATCCTCGCCCTAAGAAGAACAGAGGACGGCCTCCCGGTACAGGGAAGAAGCAAATGGATGCTTTGGGGACTGGCGGTGTTGGCTTTACTCCGCATGTCATTCTGGTGAATCCAGGAGAGGATATTGCCTCAAAAGTTATGTCATTTTCACAGCAGGGGCCGCGAACCATTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACCCTTCACCAACCCGCAGCTGGTAGTCTTGTTCTAGTACATAATGAGTGCATGGTGTTGGTCACCCCTGACCTGCCGTTCGGGCTTATCTACATGGAAATTAAGGGCCGCTACGAAATCATCTCTCTATCAGGTTCCTTCTTGATTTCCGACAATAATGGTAATCGAAGTCGAACCGGTGGTTTAAGTGTGTCTCTAGCAAGTGCAGATGGTCAAGTTCTTGGTGGAGTGACCAACATGCTAACAGCAGCATCTACAGTTCAGGTCATAGTCGGTAGCTTTCTTGTCGACGGGAAAAAGCTAGGCGATAATATACAGAAATCTGGGCCATCTTCGACATCACCCAATATGTTAAACTTTAATACACCCGTGGCAGCAGGCTGTCCGTCTGAAGGCGCTTCAAATAACTCATCCGACGACAATGGTGGAAGCCCTTTAAGCCGGGGGCCGGGAATGTACACCAACGCCAACCAACCAATTCATAATATGCAGATGTATCAATTATGGGGTAGTCGAAATCAATAA 1146 48.95 MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRFPFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSLVLVHNECMVLVTPDLPFGLIYMEIKGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSPNMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9376559 9384049 - Carg26192-RA Car16g01092 164244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01092 381 MobiDBLite consensus disorder prediction 118 140 - -
Car16g01092 381 MobiDBLite consensus disorder prediction 64 160 - -
Car16g01092 381 MobiDBLite consensus disorder prediction 64 91 - -
Car16g01092 381 MobiDBLite consensus disorder prediction 1 42 - -
Car16g01092 381 Pfam Plants and Prokaryotes Conserved (PCC) domain 169 301 IPR005175 -
Car16g01092 381 ProSiteProfiles PPC domain profile profile. 163 323 IPR005175 -
Car16g01092 381 MobiDBLite consensus disorder prediction 313 364 - -
Car16g01092 381 MobiDBLite consensus disorder prediction 12 42 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00584 Car16g01092 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01092 Car-Chr16:9376559 Car17g00389 Car-Chr17:2588607 1.41E-50 dispersed
Car16g01092 Car-Chr16:9376559 Car19g00197 Car-Chr19:1854847 7.49E-81 wgd
Car16g01092 Car-Chr16:9376559 Car02g01368 Car-Chr2:9054123 5.81E-114 wgd
Car16g01092 Car-Chr16:9376559 Car06g00584 Car-Chr6:3348786 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01092 - - csv:101204243 612.453