Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01107 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCTACTTTTGGCCTTGGCCGAGAGAAGAAGAGGCTTCCTAGAGTGGCTACTGTGGCTGGAGTCTTGTCTGAACTTGACGATGATAGCTGCAACAGCACTGGTTCGGATGCCCTTTCGTCGGTATCGCAAGACCGTATGATCATTGTTGGGAATCAGCTCCCAATTCGAGCACATCGAGACGATAATGGAGAATGGGAGTTTAGTATGGATGAAGATTCACTTCTTTTACAGCTGAAAGATGGACTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAAGAGGTTGATCCAAGAGAGCAAGATGATGTTGCACAAACACTCTTGGATCGATTCAAGTGTGTCCCGACGTTCCTTCCTCCCGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCATTGTTTCACTATATGCTTCCCTTGTCACCGGACCTTGGTGGTCGATTCGATAGGTCGCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGCGAAGCTCGGATTCTTCCTACATAGTCCATTTCCTTCGTCCGAGATTTACCGAACCCTTCCCATAAGAGATGAACTTCTTCGAGCACTATTGAACTCTGATCTCATTGGCTTCCACACGTTTGATTATGCTAGGCACTTTTTATCTTGCTGTAGCCGAATGCTCGGTTTGTCTTATCAATCTAAGCGAGGCTACATTGGGCTTGAATACTACGGTCGTACAGTGAGTATTAAGATTCTTCCTGTCGGTATTCATATCGGTCAGCTACAGAATGTATTGAATCTGCCTGAGACGGTATCCAAAGTTGCTGAATTGCAAGAGCGGTTCAAGGGTCAAACTGTTTTGCTCGGGGTCGATGATATGGACATATTTAAAGGGATCAGCCTGAAACTTTTGGCGTTTGAACAATTGCTCCGACAACATCCCGAGAGATGGGGTAAAGCTGTGTTGGTACAGATTGCGAACCCTGCACGAGGCAGAGGGAAAGATGTACAGGAGGTTATGGCTGAAACTACTGCAACGGTGGATAGAATTAATGCAACATTCAGAAGGCCAGGATATGAGCCTGTGGTTTTGATCAACACTCCCTTGCAGTTTTACGAGCGAAACGCTTATTATGCAATTGCTGAATGCTGCCTTGTTACAGCGGTGAGAGACGGGATGAATCTTATACCTTACGAGTATATTATATGTCGACAAGGCAACGAAGAACTTGACAATGTTCTCGGGTTAAATCCTTCAACTCCAAAGAAGAGCATGCTCGTGTTGTCTGAGTTTATTGGGTGTTCACCATCACTTAGTGGTGCTATTCGTGTTAATCCTTGGAATATTGAAGCTGTCACCGAAGCGATGGACTCTGCCCTGGTAATCCCGGAGGCCGAAAAGCAACTGCGACATGAAAAGCATTATAGGTATGTTAGTACGCACGATGTTGCGTATTGGGCACGAAGCTTTTTGCAGGATTTGGGCAGGGCTTGCAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTCGGTTTAGGATTTCGAGTCATTGCCCTGGATCCAAATTTCAGGAAGCTTTCAGTTGATCATATCGTTTCGGTGTATAAACGAACCTGTCACCGAGCAATTTTGTTAGATTATGATGGTATCATGATGCTTCCTGGATCGATTAGTATGAATCCAACTTCAGAAGCCCTTGGAATCCTGAACAACCTGTGTAAAGATCCTAAAAATGTCGTGTTCCTCGTTAGCGGAAAGGATCGAAAAACTCTGACCGAATGGTTTTCACAGTGCGAAAAACTTGGATTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCATACAGCAGATTGGGAGACGTGTGTAGGCGTGACCGATTTCGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACCGAGACAACCGATGGCTCTACAATCGAAACTAAAGAGAGTGCGCTCGTTTGGAACTACCTTTACGCGGATCCTGATTTCGGGTCGTGTCAGGCCAAGGAACTTTTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGGCAACACATTGTAGAAGTCAAACCTCAGAGCCAGACACTGGGCGGCGTGCCAACGAGGACGCTGGCCCCCAAGGAGGATGAATTTAGACGCGTTAGCCCAAAAAGGACAATATCTGTTAGCGGTGGGCTTGAGCTTTTACAAATGGTATCAGAGCCATTCACCGGGTGGTGCACCACCGTGCGGGCCTCCAAGTGGGTGGATTGCGAGATCGTTGTAGCCCCAAAAAGGACAATATCTGTTAGCGGTGGGCTTGAGCTTTTACAAATGGTATCAGAGCCATTCACCGGGTGGTGCACCACCGAGGATGCCGGGCCTCCAAGTGGGTGGATTGCGAGATCCCACATTGGTTGTAGAGGGGAACAAAGCATTCCTTGTAAGGGTGGTGTAAACAAGGGCATTGTAGCAGAACATCTCTTGCAAACAATGAAGGAGAAAGGAATGCTTCCCGATTTCGTTCTATGCATCGGAGACGACAGGTCAGACGAGGATATGTTCGAGGTGATAACAAGTGCAAAAGCCACCCTTCCTCCCGGTGCCGAAGTGTTCGGTTGCACTGTTGGCCAGAAACCGAGCAAGGCTAAGTACTACTTAGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCCGAGCATGCCGCTAGAGCTGCTCCGCAGATGACGACGACGACAACGACAACGACGCCTCACAGAGTGGTAATTTCAGAGAGGTGGTTACGGGTCGGGTGGTTCGTAGTCGGGGTTCCTAGTGCTGACATCTCTTTGATCGTTGTTTGTTATTTCAGGAATTTGTTAGGTCTTCGGCAGTATGAGTATCAAGACCTTACAGCATGGGGTCGAGCCCTCGTGGGTGGTCTTAGTTTCCCCGGCGACTTGCAGCAGCTCCGACCGGCGACATTATCTGAGCAACGATCAACGCTCACTTCCAGACAGAGAAAAGCGGTGGGCGATCACCCACGTCGGAATCCTTGCTGGACGGCGTGCGACTCACCCACGAACCAGAGGCGTGACAACGACGCTATTCCAGCGGATCTAGTCAAGAAGCGCTCGTGCAGTTCTCTCGACCCCACAACCTGCATCCACGACGACAGATTTTCAACGCAAATACCTCCTTGCGGCAGTGGACAGCCACTCACAAACGAACCCGTTCTGCTTTATATTCGCAACCACGAGTGA 3429 47.33 MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSCNSTGSDALSSVSQDRMIIVGNQLPIRAHRDDNGEWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRAKLGFFLHSPFPSSEIYRTLPIRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQERFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVMAETTATVDRINATFRRPGYEPVVLINTPLQFYERNAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEELDNVLGLNPSTPKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPNFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSQCEKLGLAAEHGFYLRPNHTADWETCVGVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQSQTLGGVPTRTLAPKEDEFRRVSPKRTISVSGGLELLQMVSEPFTGWCTTVRASKWVDCEIVVAPKRTISVSGGLELLQMVSEPFTGWCTTEDAGPPSGWIARSHIGCRGEQSIPCKGGVNKGIVAEHLLQTMKEKGMLPDFVLCIGDDRSDEDMFEVITSAKATLPPGAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARAAPQMTTTTTTTTPHRVVISERWLRVGWFVVGVPSADISLIVVCYFRNLLGLRQYEYQDLTAWGRALVGGLSFPGDLQQLRPATLSEQRSTLTSRQRKAVGDHPRRNPCWTACDSPTNQRRDNDAIPADLVKKRSCSSLDPTTCIHDDRFSTQIPPCGSGQPLTNEPVLLYIRNHE 1142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9519005 9524902 - Carg26207-RA Car16g01107 164259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01107 1142 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Car16g01107 1142 Pfam Trehalose-phosphatase 597 759 IPR003337 GO:0003824|GO:0005992
Car16g01107 1142 Pfam Trehalose-phosphatase 875 947 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01086 Car-Chr1:10183913 Car16g01107 Car-Chr16:9519005 6.87E-130 dispersed
Car06g00577 Car-Chr6:3316624 Car16g01107 Car-Chr16:9519005 5.02E-24 dispersed
Car16g01107 Car-Chr16:9519005 Car18g00415 Car-Chr18:2600958 2.26E-134 dispersed
Car16g01107 Car-Chr16:9519005 Car10g00127 Car-Chr10:601967 3.59E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01107 K16055 - csv:101207192 1500.72