Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01109 ATGAGCTTTCAAGATATCGAGGCTGGTCGCCCGTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCCACGCAAGCCGTTGCCTCAGGTATATTTCAGATTAATACTGCCGTTGCTACGTTTCAGAGGCTTGTTAACACCTTAGGTACGCCGAAGGATACGCCTGAGCTACGCGAGAAGCTGCACAAGACCAGGTTACATATTGGACAGTTGGTTAAAGATACCTCTGCCAAACTTAAACAAGCCAGTGAAATAGATCATCATGCAGAAGTTAATGCCAGCAAGAAAATTGCAGATGCTAAACTTGCAAAAGATTTTCAAGCAGTGTTGAAAGAATTTCAGAAGGCTCAACGACTTGCAGCTGAGAGGGAAACAGCATATACACCTTTTGTTCCCCAGACTGTTCTACCTTCTAGCTACACAGCAGGCGAATCAGATGCAAGCTCAGAAAAGAATCTTGAACAGCGTGCTCTCCTTGTGGAATCCAGGAGACAAGAGGTCTTGCTGTTGGACAATGAAATCGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGTATTCATGAAATCCAGCACCAAATTGGAGAAGTGAATGAAATTTTTAAAGATCTTGCAGTTTTAGTCCATGAACAGGGAGCCATGATTGATGATATTGGATCCAACATAGAGGGCTCCCATGCTGCAACATCACAGGGAACAACTCAGCTGGTAAAAGCCTCAAAGACGCAAAGATCAAATTCATCTCTGGTGAGCCCTTATGTTTCCTTATATTCATCATTAACTTTTTTTTATATCAATTAG 813 42.8 MSFQDIEAGRPFASSRRDLINGKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASEIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQTVLPSSYTAGESDASSEKNLEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIHEIQHQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEGSHAATSQGTTQLVKASKTQRSNSSLVSPYVSLYSSLTFFYIN 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9558909 9563117 - Carg23600-RA Car16g01109 164261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01109 270 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Car16g01109 270 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Car16g01109 270 Pfam SNARE domain 218 253 IPR000727 -
Car16g01109 270 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00569 Car16g01109 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01109 Car-Chr16:9558909 Car06g00468 Car-Chr6:2592637 9.96E-10 dispersed
Car16g01109 Car-Chr16:9558909 Car06g00569 Car-Chr6:3253771 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01109 - K08488 bhj:120089793 461.455