Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01156 ATGGGCAGTATGGGGGGAAGGCAAAGAACTTACAGCGCCAATTCGACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACTGTTTTTAGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAATGTTTGGATCTTGATCGCTGCAATAGTAATTTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCTAACATTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAGACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTTGTTCTATCCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTTGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGAAACAGGCGATAGACAGCGCGCCAGAAATACCTTCACGGGAACCCCATGCTGGATGGCGCCGGAGGTATTTCAACCAGGAACGGGTTATGATTCCAAGGCTGATATCTGGTCCTTTGGTATTACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAAAGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACGAAGAGGCCAACAGCTGAAAAACTTTTAAAGCACTCATTTTTCAAGCATGCAAAGCCTCCAGAGCTTTCTTTGAAGAAACTATTCGCTAACTTGCCTCCACTTTCACATCGTGTAAAGGACCTCCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAAAAAATGCCTTCATCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATAATGATATGGCAGAGATGAAGGAAGAGGAGGAAAGTATAAATTCTTGTAGTGTTAAGGATGCTTTTTGCCCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATCATCTCAGGATGAACATGGAGCAGGGGCAAGTGGTCAGGGATTGCCACAAGTGGAGTGCTTGAGCAAAAAAGGAAACTTTATGGAAAATGATAAGCTGAAAGGTGGGTTGCAAGAAAAAACTGGATGGAATAGAAATGGAACGAGCACCGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGCCCAAAACTAAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCAATTCTGCCCGGTATTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTACTGAAAAAAATCGTCGTGAGGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCTTCTGCAAACAGCCTATCAGCTCCCATAAAATCTTCTGGAGGGTTTAGAGATTCAATGGATGAAAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACATCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCGCCTCTACGAAAGTCGGCTAGTGTCGGTGATTGGATATTTGATTCCAAGCAGTCTGTCAGCCAACCCCCTAAGGAGTCTTGCAACACCAACTTACCCACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAATGAACTTATTGAATAGCTTGCAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCTTTGCCTCGAAACTCAGAGAACAATGGAATGGCTGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGATGCGGAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACCTATGAATTGACCGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCGACTTCTGGTCAGGAAGAAAATGAGATCAAGAGGGAAGAAAATGTCTGA 2193 42.91 MGSMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNFDDIRREAQTMSLIDHPNIVRAYCSFVVERDLWVVMPFMAEGSCLHLMKTAYSDGFEEVAICSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGAVKLADFGVSACMFETGDRQRARNTFTGTPCWMAPEVFQPGTGYDSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSSEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNNDMAEMKEEEESINSCSVKDAFCPQSSLRNFNSCNESSQDEHGAGASGQGLPQVECLSKKGNFMENDKLKGGLQEKTGWNRNGTSTEAEASTSGQDIVQGKPKTKMPKGRQTQSGPILPGIVLSHSLSERVRGSERFDSEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSMDEKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQPPKESCNTNLPTSILLPHLQNLFHQTSIQQDLIMNLLNSLQTADVVDATQNGKLPPLPRNSENNGMAETAAVERERLLMRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSTSGQEENEIKREENV 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9849413 9861557 - Carg19485-RA Car16g01156 164308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01156 730 MobiDBLite consensus disorder prediction 419 521 - -
Car16g01156 730 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g01156 730 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g01156 730 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Car16g01156 730 Coils Coil 343 363 - -
Car16g01156 730 MobiDBLite consensus disorder prediction 483 507 - -
Car16g01156 730 MobiDBLite consensus disorder prediction 431 453 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00521 Car16g01156 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00765 Car-Chr9:4506737 Car16g01156 Car-Chr16:9849413 7.16E-69 dispersed
Car14g01610 Car-Chr14:13000472 Car16g01156 Car-Chr16:9849413 7.76E-108 dispersed
Car15g00325 Car-Chr15:1742580 Car16g01156 Car-Chr16:9849413 1.97E-171 dispersed
Car16g01156 Car-Chr16:9849413 Car18g01016 Car-Chr18:10579415 2.44E-59 dispersed
Car16g01156 Car-Chr16:9849413 Car06g00521 Car-Chr6:2927950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89453 PF00069 Pkinase 1.70E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01156 - - csv:101213683 1345.1