Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01184 ATGGGAAACTCTACGCTTGCGAATCTTGGCGACTCCCGAGCTGTGTTGGGTAGGCTTGTTCGGTCGACGGGGGAAGTTCTTCCTATTCAGCTGTCGTCGGAGCACAATGTAAGCATACAATCAGTCCGCCAGGAGATGCAGTCTATGCACCCAGATGACTCCCAGATAGTAGTGTTGAAGCATAACGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCGATTGGAGACGTATATCTCAAAAAGCCAGAGTTTAACCGGGAGCCTTTGTATACTAAGTTTCGTCTCCGAGAGCCCTTCAGTAAGCCTATTCTGAGCTCAGAACCTGCTGTCTCTGTGCATGAACTCGATCCAGACGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTAAGCAACCAGGATGCAGTTGATATAGTTCACAAGCATCCTCACGGTGGAAGTGCAAGGAGGCTGGTGAAGGCGGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCAGACTTGAAGAAGATCGATCGTGGGGTTCGGCGTCATTTTCACGATGACACAACGGTGATAGTCGTGTTTGTGGGTTCAAGCAGAGGGGAAAGAAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAGTGAAGGTATATGCGAAGTCAGGGCTGAACACTGCCCCTTCGTAA 687 49.93 MGNSTLANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSMHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYTKFRLREPFSKPILSSEPAVSVHELDPDDQFLIFASDGLWEHLSNQDAVDIVHKHPHGGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFVGSSRGERSPVLSVRGGGVKVYAKSGLNTAPS 228
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 10034965 10036423 + Carg19457-RA Car16g01184 164336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car16g01184 228 Pfam Protein phosphatase 2C 6 167 IPR001932 -
Car16g01184 228 ProSiteProfiles PPM-type phosphatase domain profile. 1 197 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01184 Car-Chr16:10034965 Car16g00633 Car-Chr16:4034763 1.15E-119 dispersed
Car16g01184 Car-Chr16:10034965 Car03g00605 Car-Chr3:5617688 1.67E-118 wgd
Car16g01184 Car-Chr16:10034965 Car06g00111 Car-Chr6:720813 1.20E-137 wgd
Car16g01184 Car-Chr16:10034965 Car07g00353 Car-Chr7:1775218 1.56E-119 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01184 K01102 - csv:101220137 404.06