Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01190 ATGCCGATTGAAGATGATGTTGAGAGCTGCGGTAGCCGAGCCTCTGACTCCTCCTCGTCCCAAGCGAACTCGCGGCATCATCGACAGAAGCTTGATGTCTACAACGAAGTGCTCCGACGAATCCAGGAATCCAATTTTCATGAGGCGAATCTACCTGGATTTGATGATCAGCTATGGCTTCATTTCAATCGCCTCCCGGCTCGATACGCATTGGATGTGAATGTCGACAGGGCGGAAGATGTACTCATGCATAAGAGATTACTTGAATTGGCTGTAGACCCTGCTAACCGACCCGCATTCGACGTTCGTTCTGTGCAGGTTTATCCTTCTACTAATGAAAACTTTATCAATTCTTCTTTTCTGGATTCTTCAATGACGGAAGATGCTCAGAGCTCTTTGAATTATTCTAACAGACAAGGGAACCATCCACCTCCAACCTTTGGTTCTTCTCCTAATCTTGAAGCATTTGCGATTCAGGCCTGCAAGTATGGGGTCGAAGATAGGGACAGTGCCCTAAACATGACACCCTGCTTTTCTCGGCCAATGCATGAGATCACATTTGCAACAATTGACAAGCCTAAACTCCTTAGTGAGTTAACTTGCTTCCTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGCTTTTGTCATCGATGGATGGCCTTATGAGGAAACCGAGGAGCTGAAAAGGGTATTAGAAAAAGAAATTTTAACTTTTAAGGAACAGTGTTGGTCAGAAAAGCAGCCCAGTCCTGCTTTGGGTAAGCATAACCAGAATAGAGTTGAATCTTTTCCTTGTTGTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAATTTGAGAATAAAGTTGGATCCGGGTCGTACGGGGACCTGTATCGGGGCACTTATTGTAGTCAGGAAGTAGCTATTAAAGTACTGAGGCCTGAGCGTCTTAACGAAGAGATGGTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTCATTGGAGCATGTACCAAACCTCCAAACCTCTGCATCGTGACGGAGTTTATGTCGAGAGGAAGTCTATATGACTTCCTTCATAAGCAAAGAGGTGTATTTAACCTTCCATCTTTACTTAAAGTAGCCATTAACATTTCAAGAGGGATGAACTATTTGCATCAAAATAATATAATCCATCGAGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTTCAAACTCAATCTGGAGTAATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTTATTGAGCATAAACCATATGACCATAAGGTAGATGTTTTCAGCTTTGGAATAGCTTTATGGGAGCTTTTAACCGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCAGCTGTTGGCGTAGTCCAGAAGAGACTGCGACCTACAATACCGAAGAATGCTCATCCCGTTGTTGCTGAACTGCTTGAAAGATGCTGGAGGCAGGATCCAACCGAACGGCCAAACTTCTCTGAAATTTTAGAGATATTCAAACAGATAGCTGAGCAGGTAAGGTAG 1665 43.18 MPIEDDVESCGSRASDSSSSQANSRHHRQKLDVYNEVLRRIQESNFHEANLPGFDDQLWLHFNRLPARYALDVNVDRAEDVLMHKRLLELAVDPANRPAFDVRSVQVYPSTNENFINSSFLDSSMTEDAQSSLNYSNRQGNHPPPTFGSSPNLEAFAIQACKYGVEDRDSALNMTPCFSRPMHEITFATIDKPKLLSELTCFLADVGLNIQEAHAFSSVDGFSLDAFVIDGWPYEETEELKRVLEKEILTFKEQCWSEKQPSPALGKHNQNRVESFPCCVEIPTDGTDVWEIDTRQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLRPERLNEEMVKEFSQEVYIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSRGSLYDFLHKQRGVFNLPSLLKVAINISRGMNYLHQNNIIHRDLKTANLLMDENMVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDHKVDVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKRLRPTIPKNAHPVVAELLERCWRQDPTERPNFSEILEIFKQIAEQVR 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 10064463 10070633 + Carg19451-RA Car16g01190 164342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01190 554 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Car16g01190 554 Coils Coil 234 254 - -
Car16g01190 554 MobiDBLite consensus disorder prediction 1 28 - -
Car16g01190 554 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g01190 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Car16g01190 554 Pfam Protein tyrosine and serine/threonine kinase 297 545 IPR001245 GO:0004672|GO:0006468
Car16g01190 554 ProSiteProfiles ACT domain profile. 184 262 IPR002912 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00396 Car-Chr9:2189248 Car16g01190 Car-Chr16:10064463 3.82E-22 dispersed
Car11g01389 Car-Chr11:11360686 Car16g01190 Car-Chr16:10064463 0 dispersed
Car16g01190 Car-Chr16:10064463 Car19g00592 Car-Chr19:7307944 0 dispersed
Car09g00308 Car-Chr9:1709692 Car16g01190 Car-Chr16:10064463 5.47E-26 transposed
Car01g01564 Car-Chr1:13026120 Car16g01190 Car-Chr16:10064463 5.49E-81 wgd
Car16g01190 Car-Chr16:10064463 Car06g00116 Car-Chr6:746325 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89454 PF07714 PK_Tyr_Ser-Thr 1.60E-74 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01190 - - csv:101220844 1013.45