Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g01213 ATGTCGTTGAAGCCTTCGGATTTGGACTCTTCAGCTTTTGATGCGCAATCTTCGTCCAATCCGATTCCCTCGGATGCTACTCCGGTTCCCTTGGATCCCCCCTCCACCTCCTCCACCCTCTCTGAATCTGAAGAAAATCACTGCTCATCGTCCTCACCTTCCTCCACACCACCTCCGGTTCATTTACCTCTCTCTTGGCCTCCCGATGCCACTCTTTCCCTTCAATGGATTCAGCATCTCATCGCCGCTTTCGATTGGTCTTCCAAAAATTTATCTCCATCCGAGTTTCCTTCTGTTCTTCCCGTCTCTGTTTTCGACACTCTAATCCTCACTGCTTCCAAAATCCTCCACAAAGAACCTAATTGCCTCAGAATCCTTGACGACTCAGTCGCCAGCAGCGACTCGACTGTAGTCGTTGTCGGAGACATCCACGGGCAATTTCATGATCTCATCTTTCTTCTGCAGGATGCTGGGTTTCCTTCTGATAATCGTTTCTTTGTCTTCAATGGTGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTATTCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTTCTAACCAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATAGCTGGACGTGTATTTACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCATCTAAAAGATCAAAAGGGAAGAAAAATCGTAGGATAATCTTAAATCCTGAAGCCAACGGGTTATCTCTTGGTTCATTAGAGGAACTGTCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATACCTGGTGATGTGTTGTGGTCTGATCCCTCGATGAATCCCGGGCTCTCCCCAAATAGAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCTGGTCTTGGAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCTGGGAAATTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCTACTGGGAAGAGGTACAAAAATAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCACTCATTCATAGTTTTGAAGCCATTACTCCACGACCGAAGGTCAATGCGTACTATGATTTTGAGGATGTAATTGACTCTGACGAAGAATTAGATTTGGCAACAATGACAACTGATTCCTGA 1401 45.18 MSLKPSDLDSSAFDAQSSSNPIPSDATPVPLDPPSTSSTLSESEENHCSSSSPSSTPPPVHLPLSWPPDATLSLQWIQHLIAAFDWSSKNLSPSEFPSVLPVSVFDTLILTASKILHKEPNCLRILDDSVASSDSTVVVVGDIHGQFHDLIFLLQDAGFPSDNRFFVFNGDYVDRGAWGLETFILLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVFTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDAREKRPGLGGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATGKRYKNKGAYIVLEPPNFDVPLIHSFEAITPRPKVNAYYDFEDVIDSDEELDLATMTTDS 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 10213464 10219592 + Carg19427-RA Car16g01213 164365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g01213 466 MobiDBLite consensus disorder prediction 1 62 - -
Car16g01213 466 ProSitePatterns Serine/threonine specific protein phosphatases signature. 200 205 IPR006186 GO:0016787
Car16g01213 466 Pfam Calcineurin-like phosphoesterase 136 364 IPR004843 GO:0016787
Car16g01213 466 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02536 Car-Chr4:20085850 Car16g01213 Car-Chr16:10213464 2.33E-135 dispersed
Car16g01213 Car-Chr16:10213464 Car11g01634 Car-Chr11:12907152 8.61E-54 dispersed
Car16g01213 Car-Chr16:10213464 Car06g00144 Car-Chr6:883249 3.13E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g01213 K04460 - csv:116402529 795.808