Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g00003 | ATGGACAATTACGGTTCTTCCCCTTCATATCCATACCACCATCCATATGCATACCCTCGTCCAGTTCCTCCTCAATACCCACCGCCTCCTCAATATCCACCTCCTCCTCAACATCCACCTCCTCCTCATTATACGCATCCAAATTCAGATCCATATGCTCGTCCTCCGTACCCTTACCCGTATGATCCTTCACATGCCTCTGTATTTGCATATCCCCCACCCCCATCTCATTCTGCCCAAGTAGAGTATTTTCAACATCCACCTCCACATTCTGGGCCTGTACCTTCCCCATATTCTTACGGTGACGCCTCTTATACTAATGATAGTGCCAGGCCATCCATTCAATATCATAACAATTTCCAACCTGGTACATCCCCATATCGGTATGAAGAATCTAGTACATACCCTCCCCCAGAAACTCAATACCCACCACCCCCTTCGCGAGTAAATAACTCCTCTGGCCACTATGATAGCACTGATTCGCCTTCAGTTTCATTATTGTCGCATTCACCTCAAATTTCAAGATATGATCGATTCACCTCAAATTACAAGAATGAAGAACCTGGTACATACCCTCCCTCAGAAAGTCAATACCCACCACCCCCTTCACGAGCAAATAGCTTCTCTGGCCACTATAATGGCACTGATTCCTCATCGCCTGTCTCTTATGCATACCCGCCTCTGGATGACCTTTTGGGTAATGTACATTTGTCTGATCATCAACCTACTTCTCCTGCATCACCTTCAGTGCCTGCACAGCCTTCAGTTTCATTATTGTCGCATTCACCTCAAATTATAAGATATGATCGGCGTGACCGATTTTATGGCTTTCCTAATTCATCATTTTCTAGTTTCGATACGGGGAATTCATATCAAATGGCTTCATCCAACCAACCTTCATTTTCCCATTCAAGCTCATTTGGTGGGTCTCAACATAGTCAGAACTTGCAGATTGTTCCATTGCACAGTAAAGCATCATTGAAGGTTTTGCTGTTGCATGGAAACTTAGAAATATGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAGACCTTGGGGGATATGTTTGCAAAATTACCTGGGAATATGAGCAACAAAGTTGAAGGACATGTGAGTCATAAGATCACTAGTGATCCTTATGTTTCGATCTATGTAGCAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAATCCTGAATGGAGGCAGCATTTCTATGTTCCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCGCAGCTAATAGGAACTGTAACAATTCCTGCAGAACAAATATATGCAGGGTCTGTAGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAGCCTGGAGCTGCTCTAACTATTTCTATTCAATATACCCCAATGGACAGGCTTAGCACTTATCATCATGGAGTGGGAGCTGGCCCTGATTACCAGGGGGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTCACTCTGTACCAAGATGCCCATGTTCCAGATGGACACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACATGGGAAGTGTTGGCATGACATCTTTGATGCTGTACGTCAGGCTCGCAGGTTAATTTATATAACTGGGTGGTCGGTGTGGCACAAAGTGAAACTAGTTCGAGATACTGGCTATGGGACAGAGTGTACCCTTGGAGATCTCCTGAGGTCAAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGATATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGATTTTTCAAACAATCCTCTGTACAAGTGATACTTTGTCCTCGGATGGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATCTATACACACCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGGCTCGATTTATGTGACGGGCGGTATGATAATCCATCACATCCCATATTTCGGACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGTACTGTTGGTTGTCCAAGAGAACCGTGGCATGATCTGCACAGCAAAATTGAAGGTCCAGCAGCATATGATGTTTTGACCAATTTTGAGGAGCGATGGAGGAGAGCTTCAAAACCTCACGGGATAAAAAAGTTGAAATCATATGATGATGCTTTGCTGCGTATTGAAAGAATTCATGACATAATTGGAATTTCTGAAGCGTACTGTAACTATGAAAATGATCCTGAATCATGGCATGTGCAGATTTTTCGTTCAATTGATTCAAGTTCTGTTAAAGATTTCCCGAAGGACCCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAGAATGTGCTGATTGACATGAGTATACACACAGCATACGTGAAAGCCATTCGAGCTGCCCAACACTACATTTATATAGAGAACCAATATTTCATTGGATCATCCTTCAATTGGAATTCAAACAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCGCTAAAGATTGCTGATAAAATCAGAGGAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGCGTCCCAACTGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTCATTTACAAGGCCTTGATGGAGGTTGGTCTTGAGGAGGCATTCTCTCCTCAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGATGTGGATGGAAATGATCCTTTATCTTCTGGAAGCCCTAGTGCAGAAAACTCTCCTCAGGCACTTAGTCGGAAAAGCAGAAGATTTATGATATATGTTCACTCCAAAGGCATGATAGTTGATGACGAGTATGTGATTTTGGGATCTGCTAACATCAACCAAAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGATCCTATCAACCTCATTATACATGGGCAAAGAAGCGTTCACGTCCTCGTGGACAGATCTATGGATATAGGATGTCGTTGTGGGCGGAGCATACAGGAACGATGGAAGAGTGTTTCAATGAACCGGAGAGCCTGGAATGCGTGAGAAGAGTTAGAACAATGGGAGAATTAAACTGGAAACAGTTTGCTGCAGATGAAGTAACAGAGATGAGAGGACACCTTCTGAAGTACCCTGTTGAAGTTGATAGAAGAGGGAGAGTAAAATCCCTTCCTGGACATGAAAATTTTCCAGACGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGGATTCAGGAGAACCTCACTATCTAA | 3438 | 42.99 | MDNYGSSPSYPYHHPYAYPRPVPPQYPPPPQYPPPPQHPPPPHYTHPNSDPYARPPYPYPYDPSHASVFAYPPPPSHSAQVEYFQHPPPHSGPVPSPYSYGDASYTNDSARPSIQYHNNFQPGTSPYRYEESSTYPPPETQYPPPPSRVNNSSGHYDSTDSPSVSLLSHSPQISRYDRFTSNYKNEEPGTYPPSESQYPPPPSRANSFSGHYNGTDSSSPVSYAYPPLDDLLGNVHLSDHQPTSPASPSVPAQPSVSLLSHSPQIIRYDRRDRFYGFPNSSFSSFDTGNSYQMASSNQPSFSHSSSFGGSQHSQNLQIVPLHSKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKLPGNMSNKVEGHVSHKITSDPYVSIYVANAVIGRTFVISNNENPEWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVTIPAEQIYAGSVVEGTFPILLGGKPCKPGAALTISIQYTPMDRLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKQSSVQVILCPRMAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDNPSHPIFRTLQTVHKDDYHNPTYTGSTVGCPREPWHDLHSKIEGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLRIERIHDIIGISEAYCNYENDPESWHVQIFRSIDSSSVKDFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRGNERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEEAFSPQDYLNFFCLGNREDVDGNDPLSSGSPSAENSPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGSYQPHYTWAKKRSRPRGQIYGYRMSLWAEHTGTMEECFNEPESLECVRRVRTMGELNWKQFAADEVTEMRGHLLKYPVEVDRRGRVKSLPGHENFPDVGGKIVGSFLGIQENLTI | 1145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 17533 | 27332 | + | Carg10229-RA | Car17g00003 | 164375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 201 | 222 | - | - | |
Car17g00003 | 1145 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 658 | 693 | IPR001736 | GO:0003824 | |
Car17g00003 | 1145 | Pfam | Phospholipase D C terminal | 1065 | 1135 | IPR024632 | - | |
Car17g00003 | 1145 | Pfam | Phospholipase D Active site motif | 659 | 693 | IPR001736 | GO:0003824 | |
Car17g00003 | 1145 | Pfam | Phospholipase D Active site motif | 992 | 1018 | IPR001736 | GO:0003824 | |
Car17g00003 | 1145 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 991 | 1018 | IPR001736 | GO:0003824 | |
Car17g00003 | 1145 | ProSiteProfiles | C2 domain profile. | 312 | 458 | IPR000008 | - | |
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 14 | 70 | - | - | |
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 100 | 136 | - | - | |
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 1 | 257 | - | - | |
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 146 | 192 | - | - | |
Car17g00003 | 1145 | MobiDBLite | consensus disorder prediction | 237 | 257 | - | - | |
Car17g00003 | 1145 | Pfam | C2 domain | 334 | 460 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00350 | Car-Chr7:1750871 | Car17g00003 | Car-Chr17:17533 | 0 | dispersed | |
Car08g00568 | Car-Chr8:3743854 | Car17g00003 | Car-Chr17:17533 | 0 | dispersed | |
Car06g00647 | Car-Chr6:3875202 | Car17g00003 | Car-Chr17:17533 | 0 | transposed | |
Car17g00003 | Car-Chr17:17533 | Car08g00824 | Car-Chr8:5496173 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g00003 | K01115 | - | csv:101218942 | 1902.1 |