Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00043 ATGAGCGGCGGAGGTGAAGGAACGACGCTGGAATTCACCCCGACGTGGGTCGTTGCCGCCGTCTGTACCGTCATCGTCGCCATTTCCCTCGCCTTAGAGCGCCTCTTACACTTCCTCGGAAAATACCTCAAGAAAAAGAACCAGAAGCCGCTCTATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCGTTATCTCAAAATTATGTGTTCCTGAGAGTTTGACCGAGCATTTCCTTCCGTGTAATCTGAAGGATAAAGCTAAAGCTGAACACGATTCGCACTCTGGTGAAACTGGTTCGTCAACGACGAAACATTTTCAAACGTTCTTTGTTTCGAGTATTTCTGGCTCGGCCAGGCGCCTTCTATCTGAGGGATCGGCTGCACAGGCTGGTTATTGTGGTAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTACATCATTTACATATTTTTATCTTCATCCTAGCTATCGTCCACGTGTCGTTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTACGATACCGAACAAGTTCTAAAACCAAAAGTCACCCACGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGTATTGGTAAAGATTCAGCTCTTCTGGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTTACTAAATCAGATTATATAACGTTACGGCTTGGTTTCATTATGACACACTGCAGGGGCAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGATTTCAAGCATGTTGTCGGTATCAGGCAAGTTATATCTGGAACTGGAAGTACCCTTTTACATTTCGCTGCCTGTTGGTATCTTTGGATCTTCGTGGTTGTCTTCTTGTTCCTTAATGTTAACGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTCGCTGTGGGAACAAAGCTGGAACATGTGATAACCCAGCTGGCTCACGAGGTTGCCGAGAAGCACATAGCAATTGAAGGCGAGCTAGTAGTCCAACCATCTGATGATCACTTTTGGTTTCAGCGGCCCCGTTTTGTTCTCTTCTTGATCCACTTCATACTATTCCAAAATGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGCCAAGTCCGCTATATCATTCCAAGGCTTATTATTGGGGTGTTTATTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATCGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCCCAGAAGGTGAAGAAAAGAAAGGGACTTAGAGCAGCTGCCGATGCCTCCAGCCAAGGAGGCAAGGAAGGTAGTTCTACTGTGGGGGGGATTCAACTGGGAAGTGCAATGCGCAAGGCTTCTGCACCTCAAGAAATTAAGCCTGATGGCTCCAAATCAGATGGTCTGCCTTAG 1602 44.63 MSGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLYEALQKVKEELMLLGFISLLLTVFQGVISKLCVPESLTEHFLPCNLKDKAKAEHDSHSGETGSSTTKHFQTFFVSSISGSARRLLSEGSAAQAGYCGKKNKVPLLSLEALHHLHIFIFILAIVHVSFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGIGKDSALLGWLHSFLKQFYASVTKSDYITLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGIRQVISGTGSTLLHFAACWYLWIFVVVFLFLNVNGWHTYFWIAFIPFVLLLAVGTKLEHVITQLAHEVAEKHIAIEGELVVQPSDDHFWFQRPRFVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADASSQGGKEGSSTVGGIQLGSAMRKASAPQEIKPDGSKSDGLP 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 207740 214515 + Carg10189-RA Car17g00043 164415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00043 533 Pfam Mlo family 8 495 IPR004326 GO:0006952|GO:0016021
Car17g00043 533 MobiDBLite consensus disorder prediction 511 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00043 Car-Chr17:207740 Car17g00565 Car-Chr17:5237572 5.37E-137 dispersed
Car20g00911 Car-Chr20:9872784 Car17g00043 Car-Chr17:207740 1.40E-130 dispersed
Car17g00043 Car-Chr17:207740 Car08g00870 Car-Chr8:5818765 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00043 K08472 - csv:101211868 932.169