Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00096 ATGGGTGGCCACGGAAAGGTCTTTACATTGGCTGAAGTCTCTCAGCACAATACCCGCCAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAACGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGACTGGCACAGGTAAGGATGCAACAGATGATTTCGAAGACGTGGGTCATAGTGAGAGTGCAAGAGAAACGATGAACAAATACTATGTTGGAGACATCGACATCTCGACAATCCCTGAACGTTTGACATACACAGCTTCGAAGCAGCCTCATTATAATCAAGATAAGACGACCGAGTTCATCGTCAAGCTTCTCCAGTTCCTGGTCCCTCTCGCAATCTTGGGTCTGGCAGTTGGTATCCGCTTTTATAGCAAATCAACCTGA 405 47.65 MGGHGKVFTLAEVSQHNTRQDCWLIINGKVYNVTEFLEDHPGGDEVLLTGTGKDATDDFEDVGHSESARETMNKYYVGDIDISTIPERLTYTASKQPHYNQDKTTEFIVKLLQFLVPLAILGLAVGIRFYSKST 134
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 556509 559563 + Carg10136-RA Car17g00096 164468
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car17g00096 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Car17g00096 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Car17g00096 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01928 Car-Chr14:14765753 Car17g00096 Car-Chr17:556509 2.23E-44 dispersed
Car15g00942 Car-Chr15:6720301 Car17g00096 Car-Chr17:556509 4.57E-62 dispersed
Car14g01692 Car-Chr14:13456992 Car17g00096 Car-Chr17:556509 9.55E-76 wgd
Car17g00096 Car-Chr17:556509 Car19g00129 Car-Chr19:1153633 2.63E-62 wgd
Car17g00096 Car-Chr17:556509 Car02g01436 Car-Chr2:9379656 1.57E-63 wgd
Car17g00096 Car-Chr17:556509 Car06g01070 Car-Chr6:8049560 1.48E-74 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00096 K23490 - csv:101213506 251.521