Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00127 ATGGCCGGTGAGGTAGCGGTGGAGTGTCCTGCGGCGGCGGCGGCGGCGACAGAAGTAGGCGATTCCATTGAGCAGTCCCATATGTTGGAGAGAAAATGGACCTTTTGGTTCGATAACCAGTCGAGGCCGAAGCAAGGTGCTGAATGGGGCAGCTCTCTGCGCAAGGTCTATACCTTCGACACTGTTGAAGAATTTTGGTGGTACGTCCTTCGATCCCCCTCTTTGCCAATGATTAAACTGGTTCTGTTTTCATTTTTCTTTGACGTTCTGCTACGATTTTGTTCATATTCTGTTTCTCCGATTTGTGATTCCGGGCTTTTGTACAGTTTTTACGATCAGATATTGAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACTTGTTCAAAGCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGTGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGACTAACCTCGATACCATGTGGCTGGAAACGTTGATGGCATTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAGCTTGCACTGTGGACCAAGACAGCAGCAAATGAGGCTGCTCAGATGAGCATCGGTAGGAAATGGAAGGAGATTATCGACGTTACCGACAAGATTTCCTTCAGCTTTCATGATGATCTGAGAAGGGAAAAGTCGGCAAAATCGTCTCGGTACAGTGTCTGA 738 48.24 MAGEVAVECPAAAAAATEVGDSIEQSHMLERKWTFWFDNQSRPKQGAEWGSSLRKVYTFDTVEEFWWYVLRSPSLPMIKLVLFSFFFDVLLRFCSYSVSPICDSGLLYSFYDQILKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVTSSRKTNLDTMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTAANEAAQMSIGRKWKEIIDVTDKISFSFHDDLRREKSAKSSRYSV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 774068 775301 + Carg10105-RA Car17g00127 164499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00127 245 ProSitePatterns Eukaryotic initiation factor 4E signature. 125 148 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Car17g00127 245 Pfam Eukaryotic initiation factor 4E 29 226 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00939 Car17g00127 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00454 Car-Chr13:6919246 Car17g00127 Car-Chr17:774068 1.56E-64 dispersed
Car14g00984 Car-Chr14:7154350 Car17g00127 Car-Chr17:774068 1.39E-21 dispersed
Car17g00127 Car-Chr17:774068 Car18g00418 Car-Chr18:2620258 9.43E-66 dispersed
Car17g00127 Car-Chr17:774068 Car08g00939 Car-Chr8:6287030 1.02E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00127 K03259 - csv:101208495 339.347