Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00140 ATGGAAGCTACTAGGCGTTGGTTTAATAAGTTCAGATCCAAAGACAAGCCAAAATCCTCAACAAATAAGGAGAGTGCAGGAAATGCTAGAGATGCATCGAAAGCACCAACCAGTGAAGAGTTACCCTCAAATGTCACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTATATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAGAGCAACCTGCTTAAGCATCTAGAGAAGAAGGAAACGGAGTATATGCGCCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCTCTAACAATGATAGGGAGGGGTGCTTTCGGAGAGGTTAGAGTTTGTCGTGAGAAAGCAACAGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATCTGTATCTTATTATGGAATACTTACCTGGTGGTGATATGATGACTTTACTTATGAGGAAAGATACTCTAACAGAAGACGAGGCCCGATTTTATGTTGGTGAAACAGTTTTAGCTATTGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCAGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTACAAGAAAAGGATTTTTCCCAGGGAAATAACCTCAGTGGTGCTCTTCAAAGTGATGGACGACCTGTGGCATCAAAACGCACACAACAGGAACAACTACAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCTACAGTTGGAACTCCTGATTATATTGCTCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTTGTGGGATTTCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGTAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAACTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAATGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGACGAATTGGATACTCAAAACTTTGAGAAGTTCGAAGAGACTGAAAATGCAATTCAGACGTCATCAAAATCAGGTCCATGGAGAAAGATGTTATCATCGAAGGACGTCAATTTTGTGGGTTATACGTACAAAAACTTGGAAATCATTGATGATAATCAATTGCCTGGAATAGCTGAATTGAAGAAGAAGAGCGCAAAATCTACAAGACCTTCCATCAAATCTCTTTTCGCTAACGAATCTGCAATGGCGACGAATCAACCCGTTCAAGGCAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTCCCCGAGAAACCGATCAGCACCGGTGAGAAGCATTCATGA 1659 41.05 MEATRRWFNKFRSKDKPKSSTNKESAGNARDASKAPTSEELPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGNNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDVNFVGYTYKNLEIIDDNQLPGIAELKKKSAKSTRPSIKSLFANESAMATNQPVQGSFLKLLPPQLEVPEKPISTGEKHS 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 866008 872808 - Carg10091-RA Car17g00140 164512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00140 552 MobiDBLite consensus disorder prediction 1 47 - -
Car17g00140 552 MobiDBLite consensus disorder prediction 22 47 - -
Car17g00140 552 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00140 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Car17g00140 552 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car17g00140 552 MobiDBLite consensus disorder prediction 1 21 - -
Car17g00140 552 Coils Coil 68 102 - -
Car17g00140 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car17g00140 552 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00140 552 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00953 Car17g00140 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00254 Car-Chr8:1605341 Car17g00140 Car-Chr17:866008 0 dispersed
Car10g00664 Car-Chr10:3399497 Car17g00140 Car-Chr17:866008 0 dispersed
Car11g00590 Car-Chr11:3197413 Car17g00140 Car-Chr17:866008 0 dispersed
Car11g01403 Car-Chr11:11520528 Car17g00140 Car-Chr17:866008 1.58E-151 dispersed
Car17g00140 Car-Chr17:866008 Car17g01230 Car-Chr17:9367910 0 dispersed
Car03g01325 Car-Chr3:10060765 Car17g00140 Car-Chr17:866008 0 transposed
Car17g00140 Car-Chr17:866008 Car08g00953 Car-Chr8:6369726 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89462 PF00069 Pkinase 1.00E-65 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00140 K08790 - csv:101205120 1082.4