Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00157 ATGGACCGCCGTCAAATTCAAGATCAAGAAACCTCCGCCGCCTCTTCCGCCTCCGCCGCCAAGGGAACTCATTCCAAGTTCCCAAAAGTGGCCGACGAGTACGAAATCCAATCACAAATCGGCGCGAGCGACCACAGCACAGTCTACAAAGCAATATGCAAGTCAGCAGACACACCGACGATCGTCGCCATAAAAATCATCGATAGCAACGTCGAAATTGACCAAACTGCAATTACGAACATCAACACAAATCTCTCCTTCATCAACCACCCACATATCCTGACCCCTCATTGTTGCTTCACCGCTCCCGACGGCCGCCTATGGATCGTAATGCCATTCATCCCCGCCGGCCCTCTACAAGCCATAATCTCCCAACGATTCCGAACCGGCTTACCGGATCAATTCATGTCAATTCTTATCAACCAACTCCTCCGTGCATTGGTTTTTCTACATGAAAAGGGGTTGGTTCATAAAGCCGTGAAAGCAAGCAATATCTTTTTTGATACTCATGGGTGTGTATTGCTATCAGATTTGGACGTTTCAAAGGAGATGAAGAAAGATTGTTCATCGGTGCCGTATTGGGATCCACCGGAGGAGGATTATAGTTTCAAATCAGATGTATGGTCGGTGGGGATTTTAGCAATGGAAATTGCATATGGGTGTCCTCCAATTTATGATCAAAAGGTAATCAAAGCGCAATTCTCCAAGATTTCTAGGCGATTTCCTTATGATTTGAATTTGGATAATCGATCAGGGAAGAGCGTTGTTCCAAGGAAATTTGGTGATACATTGAAGCATTTTGTGGGTTCATGTTTAGCTAAAGATCGATTTGCAAGAGCTTCGGCATTGAGTTTATTGGATCATCCATTCGTGAAGAAAGGGGAAAATTCAAATTTTTTGTTCAAGAGTATTGCTAAAGGAATGGTGGGAATTGGGGAGATGTTTGAGCAAGATAAGGATAGAATCATTGATTTGATGAAGAACGAGGTGCAATTGGGTGAGAGTAGTCAAGGTGGTGGGAAGGTTTTGAGGATTACGGGATGGGATTATAATAATTTCTTGTTTGAATTGGAGCCTGATGAGGAATCATTTGGGAAAAGGGTTAGGTTTCGTGGGGAGACGGTGTTTTCTTATAAAGAACAAGAACAATGTAATAAATTTGATATGAAATCTTTGATGCATGGTGGTGGGAGTAGTGATGAGAAGAAGAAGGAGGTTGATCAAGCTATGGATACTGAAACGTTGGCGACGTTGTTGTCTTCGTTGCTTGATAATATTGATACACAAAAGGAAATGGTTTCTATGTTGATGAATCATTGTGGCTTTATGCATGATAAGGATTTGGAAATGGTTAAGCAAATTAAGAGATTGGAGGATGAGTTGGCTGCTGAGAAAGAAAAAAGCTTTCAATTAGAGCTTAATTTTGAGCTTTTGAAGCTTAAACTTCCCGATTCCGACGAGGAACAAGAACAAGAAGAGTATGAACCCGAACCCGAACCAGAACAACAACCGGAACGAGAAGAAGAAGAAGGACCAAGAGAACCAGAACCAGAACCAGAACCAGAAGGAGGAGAAAAGGAAGAAGATGTACAAGCATTGATGCAAATCTTCGGATGA 1617 42.49 MDRRQIQDQETSAASSASAAKGTHSKFPKVADEYEIQSQIGASDHSTVYKAICKSADTPTIVAIKIIDSNVEIDQTAITNINTNLSFINHPHILTPHCCFTAPDGRLWIVMPFIPAGPLQAIISQRFRTGLPDQFMSILINQLLRALVFLHEKGLVHKAVKASNIFFDTHGCVLLSDLDVSKEMKKDCSSVPYWDPPEEDYSFKSDVWSVGILAMEIAYGCPPIYDQKVIKAQFSKISRRFPYDLNLDNRSGKSVVPRKFGDTLKHFVGSCLAKDRFARASALSLLDHPFVKKGENSNFLFKSIAKGMVGIGEMFEQDKDRIIDLMKNEVQLGESSQGGGKVLRITGWDYNNFLFELEPDEESFGKRVRFRGETVFSYKEQEQCNKFDMKSLMHGGGSSDEKKKEVDQAMDTETLATLLSSLLDNIDTQKEMVSMLMNHCGFMHDKDLEMVKQIKRLEDELAAEKEKSFQLELNFELLKLKLPDSDEEQEQEEYEPEPEPEQQPEREEEEGPREPEPEPEPEGGEKEEDVQALMQIFG 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 967875 969491 - Carg10074-RA Car17g00157 164529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00157 538 ProSiteProfiles Protein kinase domain profile. 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00157 538 MobiDBLite consensus disorder prediction 8 22 - -
Car17g00157 538 MobiDBLite consensus disorder prediction 481 538 - -
Car17g00157 538 MobiDBLite consensus disorder prediction 1 24 - -
Car17g00157 538 Pfam Protein kinase domain 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00157 538 MobiDBLite consensus disorder prediction 487 525 - -
Car17g00157 538 Coils Coil 447 474 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01610 Car17g00157 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00157 Car-Chr17:967875 Car15g00325 Car-Chr15:1742580 1.11E-46 dispersed
Car14g01610 Car-Chr14:13000472 Car17g00157 Car-Chr17:967875 7.96E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89463 PF00069 Pkinase 1.80E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00157 K08835 - cpep:111806976 950.273