Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00166 ATGGCTCGGGACGGGCATGTACTGCCGGTGGATCCACAGACGACTCTCACTGTCAAGAAGAAGAAGCAATCTTCTCGGAATTGGATTCTGCTGGATTGTACGGGCCAAGGCACCGTCCTCGATGCCGACAAGTATCAAATTATGCATCGGGTTCAAATTCATGCGCGCGATCTTCGGATTCTTGACCCTTTGCTTTCTTATCCCTCAACCATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTTCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGGCTGCCTCCTTCTAATGCGGTCCAGCTTCATGTTCAAGGAGATGGGAAAGCAAATCAGGGTCGGCAACACGACGGTGAAGCTGAAGAAGATGACTCGCCCTTTGAATTTCGTGCGCTCGAGGTAGCTTTGGAAGCTATATGCAGTTATCTTGCTGCACGAACAACTGAGCTCGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGAAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGCTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTCGAACAATTACTGAATGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAATTCGTCTTCTCCTGTAAGTGGTTCTGGTCCTGCCATTTGGTTTCCTGCCTCTCCTACCATTGGTTCAAAGATATCAAGAGCAAGCCGAGCAAGTATTGCAACTGGACGTGGGGATGAGGATGACATCGAGGAGCTCGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATACATTGATGACACAGAAGATTATATCAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGCTCTGGAACTGTTTGTTTGTCTGTCTATTCTTTGGTGGGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGAAAATCACGAATACATGTTTAAATGGGTTGTCATAGTTTCTGGAGTAGCTTGTGCGTTAATGTTCGTCGCAATTATTTACTACGCTCGCCTCAAAGGTTTGGTCGGATCTTGA 1182 45.52 MARDGHVLPVDPQTTLTVKKKKQSSRNWILLDCTGQGTVLDADKYQIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVFLRDPTDEHVIPVVEELQRRLPPSNAVQLHVQGDGKANQGRQHDGEAEEDDSPFEFRALEVALEAICSYLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLNDDDDMADLYLSRKMNSSSPVSGSGPAIWFPASPTIGSKISRASRASIATGRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVGAIFGMNIPYTWNENHEYMFKWVVIVSGVACALMFVAIIYYARLKGLVGS 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1027434 1031262 - Carg10065-RA Car17g00166 164538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00166 393 Pfam CorA-like Mg2+ transporter protein 280 380 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car17g00166 393 Coils Coil 194 221 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00995 Car17g00166 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00508 Car-Chr4:2876870 Car17g00166 Car-Chr17:1027434 4.29E-108 dispersed
Car14g00950 Car-Chr14:5749064 Car17g00166 Car-Chr17:1027434 1.99E-118 dispersed
Car16g00352 Car-Chr16:2177250 Car17g00166 Car-Chr17:1027434 3.76E-107 dispersed
Car17g00166 Car-Chr17:1027434 Car19g00399 Car-Chr19:5901130 6.72E-66 dispersed
Car17g00166 Car-Chr17:1027434 Car19g00047 Car-Chr19:324073 1.30E-176 wgd
Car17g00166 Car-Chr17:1027434 Car08g00995 Car-Chr8:6846508 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00166 K16075 - csv:101203841 674.855