Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g00183 | ATGAGTGCGGGCGCGGCGACGTTCCCGTCTATACTCGACAAACCCCTCAACCAATTGACGGAGGATGACATTTCGCAGCTCACTCGGGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCGTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCACTGCTTGAACCCTGTGATGATTCCGGCGCCAATGCTCTCAGGAAGGTCGTCGTTTTGCCTCGGGTGAATTCAAATCAAGGCGATTCACCCAAAGAACCGAGTGATGATGCTCAGTTTACAATGTCAGTTGATGAATCTGCGTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCAGCTGAGCCAGACAACAATGTCACCAGTCCCAGAAATCAATACGAAACAAATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAAGTGAATGTGTATGATGGAGTTCCACCGGATAAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATGTCCCTCAGAATCATCCCTTGGGTGGAACTGCTGCATGTCAGTCTCCACCACGACCTTTGCAGACTTGCAGTGACAAAGATGACTTTTTTCCTCCTAGTGCTACCATGTATCGAAATGTGCATACAGATGTTGAGGGTCAGGCGAGTCGAAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATCCAGAATTGTCTTCTTCTAGCCTGGAAGGTTATATGAACCATCATATGAGGACGCACATACCCAATAAGAATTTAGGTCAGTTTGCGACAAGCTCTTTATCCCCTACTGGAGTAGCTAAAGCTTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGTTTTCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGA | 948 | 45.89 | MSAGAATFPSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGANALRKVVVLPRVNSNQGDSPKEPSDDAQFTMSVDESAYSNVETAKSTPEDPPAEPDNNVTSPRNQYETNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHVPQNHPLGGTAACQSPPRPLQTCSDKDDFFPPSATMYRNVHTDVEGQASRKVSLQRYLEKRKDRGRLKNKKNPELSSSSLEGYMNHHMRTHIPNKNLGQFATSSLSPTGVAKAFVGTADNQPKLACFPVDLNVKDIQEC | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1121634 | 1126051 | - | Carg10048-RA | Car17g00183 | 164555 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g00183 | 315 | Pfam | tify domain | 144 | 172 | IPR010399 | - | |
Car17g00183 | 315 | MobiDBLite | consensus disorder prediction | 123 | 138 | - | - | |
Car17g00183 | 315 | ProSiteProfiles | Tify domain profile. | 138 | 173 | IPR010399 | - | |
Car17g00183 | 315 | MobiDBLite | consensus disorder prediction | 109 | 138 | - | - | |
Car17g00183 | 315 | Pfam | Jas motif | 223 | 247 | IPR018467 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g01006 | Car17g00183 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car17g00183 | Car-Chr17:1121634 | Car14g01057 | Car-Chr14:9321681 | 1.87E-08 | dispersed | |
Car17g00183 | Car-Chr17:1121634 | Car08g01006 | Car-Chr8:6906738 | 1.88E-176 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5027 | PF06200 | tify | 2.70E-15 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g00183 | - | - | csv:101204377 | 574.318 |