Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00183 ATGAGTGCGGGCGCGGCGACGTTCCCGTCTATACTCGACAAACCCCTCAACCAATTGACGGAGGATGACATTTCGCAGCTCACTCGGGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCGTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCACTGCTTGAACCCTGTGATGATTCCGGCGCCAATGCTCTCAGGAAGGTCGTCGTTTTGCCTCGGGTGAATTCAAATCAAGGCGATTCACCCAAAGAACCGAGTGATGATGCTCAGTTTACAATGTCAGTTGATGAATCTGCGTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCAGCTGAGCCAGACAACAATGTCACCAGTCCCAGAAATCAATACGAAACAAATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAAGTGAATGTGTATGATGGAGTTCCACCGGATAAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATGTCCCTCAGAATCATCCCTTGGGTGGAACTGCTGCATGTCAGTCTCCACCACGACCTTTGCAGACTTGCAGTGACAAAGATGACTTTTTTCCTCCTAGTGCTACCATGTATCGAAATGTGCATACAGATGTTGAGGGTCAGGCGAGTCGAAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATCCAGAATTGTCTTCTTCTAGCCTGGAAGGTTATATGAACCATCATATGAGGACGCACATACCCAATAAGAATTTAGGTCAGTTTGCGACAAGCTCTTTATCCCCTACTGGAGTAGCTAAAGCTTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGTTTTCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGA 948 45.89 MSAGAATFPSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGANALRKVVVLPRVNSNQGDSPKEPSDDAQFTMSVDESAYSNVETAKSTPEDPPAEPDNNVTSPRNQYETNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHVPQNHPLGGTAACQSPPRPLQTCSDKDDFFPPSATMYRNVHTDVEGQASRKVSLQRYLEKRKDRGRLKNKKNPELSSSSLEGYMNHHMRTHIPNKNLGQFATSSLSPTGVAKAFVGTADNQPKLACFPVDLNVKDIQEC 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1121634 1126051 - Carg10048-RA Car17g00183 164555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00183 315 Pfam tify domain 144 172 IPR010399 -
Car17g00183 315 MobiDBLite consensus disorder prediction 123 138 - -
Car17g00183 315 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Car17g00183 315 MobiDBLite consensus disorder prediction 109 138 - -
Car17g00183 315 Pfam Jas motif 223 247 IPR018467 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01006 Car17g00183 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00183 Car-Chr17:1121634 Car14g01057 Car-Chr14:9321681 1.87E-08 dispersed
Car17g00183 Car-Chr17:1121634 Car08g01006 Car-Chr8:6906738 1.88E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5027 PF06200 tify 2.70E-15 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00183 - - csv:101204377 574.318