Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00216 CTCTCTCTCTTCTTTCTCTCTCTTCTTCTCATCCAAACAAAACCCATTTCAAAATTTCTGTTTTTTCCTTCAGAGATTTTCCACAAATCCTCTCACCACGACGAAGGTAAAGGAATGAATGGCGCTACAGCAACAGATTCTGAAGCAGACAACTCTGAATATGTCGAAGTTGATCCCACCGGCAGATATGGAAGATACAATGATGTTCTTGGCAAAGGAGCATCCAAGACAGTTTACAGAGCTTTTGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTCTGTGATTTCCTTCAAACCCCTGAAGATCTCGAGAGGCTATACAGAGAAATCCATTTATTGAAGACGCTAAAACATAAGAACATAATGAAATTCTGTTCTTCCTGGGTCGACACTGCCAATAGAAACATTAACTTCGTTACAGAGATGTTTACTTCCGGGACTCTCAGACAATACAGGCTGAAGCACAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTAAGAGGGCTTCATTATCTTCATAGCCATGATCCTCCTGTTATCCACAGAGACCTTAAATGTGATAACATTTTTGTTAATGGGAATCAAGGGGAAGTCAAGATTGGTGATCTTGGACTTGCTGCTGTTCTTCGTAAATCCCATGCCGTTCGATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATATATGAAGAGGAGTACAATGAATTGGTTGATATCTATTCTTTTGGAATGTGTATCCTTGAGATGGTTACTTTTGAATATCCATACAGTGAATGCACTCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAGCCTGATGCTTTGTATAAGGTGAAGGATCTCGAGGTTCGGGTTTTCGTCGAGAAATGCTTGGCTACCGTGTCGACTAGGCTGTCTGCTAGAGAGCTTTTGAATGACCCTTTTCTTCAAATTGATGGTTGTGATTCTTTACTCACGCCAATAGATTACTATTCTGAATATGATGAAGTGAATAATGGTTTGGATTACTGTCTGATTGATAACGAAGTGAGCGAAATCGATCTTTTTTCGTGTCAAGACGACGAGCATTTGGCAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGGCGACGACGATATATTTCTACGGCTTCGGATTGCGGATAAAGAAGGTCGAATACGAAACATCTACTTCCCGTTCGATTTAGAGAATGATAGTGCTTTAAGTGTTGCAAATGAGATGGTTTCTGAGCTTGATATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGATGAGATAGCTACATTGGTGCCAGAATGGAAGAGAGGAACAAGCTCTGATGCTAATGTTTGTCACAATTGCGCTATAAACGGTTCGGTTTTGGATTACGTTTCGCCGAACCATCCGACGACGAAGAACCTACACGTTCTTCAGTGTTCTGAGGATCATGGCTGTGCTTCTATCCATGGACGTTTTGAGGAGATTACATATCAAGTTGAGGGGTCGGAACAATTCAATGGATCATCGGAGAATCCGAGCGATATCCATTATGCCGATATTTGGGCGCAGCGAGATGGCAATGAATCACATGGAGGAGCATCAGAACAGCTGAAGCTCAAGAAGGAAGAAAGTAGTGTACATAAGAACAATAATGATCACCAAACAGAATTCCGAACGAGAAACTCGAGCTCATCGAATCGTTTGGTGTCGTTTGCCGATGATCCCGAGAACGAGATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGGGATCAACAATTAGGAGTCAAGGTCAAATCTTTCAGCTTACAGCCGAATCCGAACCTTGCCGAGACCGACCGTGGAGCTTTCGTATCGTTGCTTTCACCAAATATCAATGAAGCAGCAAAACATAAGGCTGGTATCACTTCACATTCCCCCCATATTGCTGCTGACAGTGTGTTGGAAAACCGAACCTTTCAAGACGACAGCTTCGATGTCGACGAGTCGGGTAGTCCCGAGCTGATGATTACGGCCAAGAGCTTCTATGCAGGGACATTGTTACCTCATTCTCTACAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG 2148 42.36 LSLFFLSLLLIQTKPISKFLFFPSEIFHKSSHHDEGKGMNGATATDSEADNSEYVEVDPTGRYGRYNDVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPEDLERLYREIHLLKTLKHKNIMKFCSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAVLRKSHAVRCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDLEVRVFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLTPIDYYSEYDEVNNGLDYCLIDNEVSEIDLFSCQDDEHLADVDITIKGRRRGDDDIFLRLRIADKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDDEIATLVPEWKRGTSSDANVCHNCAINGSVLDYVSPNHPTTKNLHVLQCSEDHGCASIHGRFEEITYQVEGSEQFNGSSENPSDIHYADIWAQRDGNESHGGASEQLKLKKEESSVHKNNNDHQTEFRTRNSSSSNRLVSFADDPENEIRQELRWLKAKYQMQLRELRDQQLGVKVKSFSLQPNPNLAETDRGAFVSLLSPNINEAAKHKAGITSHSPHIAADSVLENRTFQDDSFDVDESGSPELMITAKSFYAGTLLPHSLQRATSLPVDAIDF 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1308498 1311675 - Carg05420-RA Car17g00216 164588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00216 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Car17g00216 715 MobiDBLite consensus disorder prediction 31 51 - -
Car17g00216 715 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 387 442 IPR024678 GO:0004674|GO:0005524
Car17g00216 715 ProSiteProfiles Protein kinase domain profile. 64 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00216 715 Pfam Protein kinase domain 68 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00216 715 Coils Coil 589 609 - -
Car17g00216 715 MobiDBLite consensus disorder prediction 543 564 - -
Car17g00216 715 MobiDBLite consensus disorder prediction 534 578 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01027 Car17g00216 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00846 Car-Chr11:5156074 Car17g00216 Car-Chr17:1308498 0 dispersed
Car12g01079 Car-Chr12:10561342 Car17g00216 Car-Chr17:1308498 0 dispersed
Car13g00699 Car-Chr13:8297851 Car17g00216 Car-Chr17:1308498 3.80E-145 dispersed
Car16g00906 Car-Chr16:7419118 Car17g00216 Car-Chr17:1308498 3.38E-123 dispersed
Car17g00216 Car-Chr17:1308498 Car18g00187 Car-Chr18:1022231 2.99E-172 dispersed
Car17g00216 Car-Chr17:1308498 Car05g01115 Car-Chr5:10707838 0 wgd
Car17g00216 Car-Chr17:1308498 Car08g01027 Car-Chr8:7007254 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89465 PF00069 Pkinase 8.80E-49 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00216 K08867 - csv:101210511 1147.88