Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car17g00224 | ATGCTGTCGAATCAGCTGCAGAATGGGATGGATAGAGCAAAAAGCATGTGGTCTCGTCTTCCGGACACCGATGAAAATGAGGACGACCTCGTTAGCTTCTTGAAGAAGAACGATGGGGGCGGCGTCGAAAGCCTTGATTACGAGGTCATCGAGAATTATGCTTACTGGGATGAACAGGCGCAAAGAGGAAGATTATTTGTTGGCTATAGTGTGGTAGTTAAGTGGCTGTATGCTTTGTTCATTGGCATTGTTAACGACTTCTCTTGGCTGCGTCCAGGCACAGGATTGGCTGCAGTTTTCATAAATATGGCTGTTGAGAACTTTGCTGGCTGGAAATTTTCATTGACATTTGCTCTAATTCAGAAGTCATATGTGGCTGGTTTTATAGTATACTTAGCCATCAACTTGGGTCTAGTGTTTTCATCTGTATATATAGTCACTCATTTTGCTCCTGCAGCAGCTGGGTCTGGCATACCTGAAATCAAGGGTTATTTGAATGGAATTGACATTCATGGTGTCCTTTTCTTCAGAACCTTAATCGGAAAGATATTTGGAAGCATTGGTTCAGTGGGAGGTGGATTGGCTTTAGGCAAAGAAGGGCCGCTTGTACATACGGGCGCCTGTATTGCTTCTTTGCTAGGACAAGGTGGATCTGGTAAATATCATCTAAATTCCAGGTGGTTACAAGTGTTCAAGAGTGACCGGGATCGTCGTGATCTTGTAACATGTGGGTGTGCAGCAGGAGTTGCTGCAGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCACTGGAAGAAGTAACATCTTGGTAA | 813 | 44.28 | MLSNQLQNGMDRAKSMWSRLPDTDENEDDLVSFLKKNDGGGVESLDYEVIENYAYWDEQAQRGRLFVGYSVVVKWLYALFIGIVNDFSWLRPGTGLAAVFINMAVENFAGWKFSLTFALIQKSYVAGFIVYLAINLGLVFSSVYIVTHFAPAAAGSGIPEIKGYLNGIDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSGKYHLNSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSW | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 1381171 | 1384193 | - | Carg05428-RA | Car17g00224 | 164596 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car17g00224 | 270 | Pfam | Voltage gated chloride channel | 139 | 269 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car15g00084 | Car-Chr15:497110 | Car17g00224 | Car-Chr17:1381171 | 7.55E-58 | dispersed | |
| Car17g00224 | Car-Chr17:1381171 | Car16g00792 | Car-Chr16:5197673 | 5.23E-69 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car17g00224 | K05016 | - | csv:101215989 | 484.567 |