Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00230 ATGTGGGAGTGCGACCATTTCAAAGCGGCCTTCTCGCGAAAACCCCAAGGCCAGGCAAATCTGTTCTCTCACAGGGGAGAGAGAGCGATGACGATGGCGATTCCGGGGAGCATTGTCGTCCTCCTTCTCCTTATGTTGCTTCTCCTCCTCCTCATCCTCCTTCTCATTGCCTGCAAGCCATGGCGCTTCTTTTCCTTCTCTCGTTCTCGCACCATCAAGGTTCCTGACCTTGAGAGACCCCTTGTCTCTGATGCTGCGGATGACACTCAAAGCCAAACCAATGAGCTTCCTAGAGATTATGATTTGGAGGGTGCACTCCAAACTGATGGACATTTTCGGTCCTCAAGATTGTACGGGCTGATTCATAAACAAAGATCGCCATCTTCATCGCCCCATTTAAGTCAGGGTGATAGATCAGTTCCAGATGTAGTTCCCGATCATTTAGAAGTTATTTCAGTTGGTCAGACACTTAAACGAACTTACTTCGCAAACCAGATTCCAGAAATTCAAAAGCATTCAAAATTGAGCCCAGAATGTGATCAACTCCATGAAATTTCAAGTCAAGATGCTTCACATGAAAGAAGTTACCTCACTTTGGAGGTTACCTCCGGTCCTTCTCGTGGGGTGCGTTATTCAATACATTCTGCAGACACGTCTAGGCTTCCGTTGACTCTTGGAAGAGTACCACCTAGTGATTTACAGCTGAAGGATTCCGAAGTCTCAGGGAAGCACGCCTTGATAAAATGGAATCTAAATAATATGAAATGGGAGCTTGTGGACTTAGGCAGCTTAAATGGGACTTTATTAAATTCTCAACCTATCAACAATCCTGATTCTGGAAGTAGACATTGGGGTGATCCAATTGAGCTTGTGAGTGGAGATGTTATAACTCTTGGTACAACCTCCAAAGTGTATGTTCATATAACATCTCAGATTGAGAATCATATTCCCTTTGGAGTTGGTTTGGCTTCAGATCCAATGGCTTTTCGTCGAGGTGGAAAAAAGCATGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTTGCTGGGGTTGATCAGTTTGGGCTCTTTGGTATCTGCGATGGACATAGTGGAGTAGGGGCCGCCAAATCTGCTAGCGAGATTCTTCCTGCGAAGGTTGCCACAATTCTATCTGATCCACTGAAAAGGGAGAGGGTAGTATCCCTTCGTGATGCTTCAGATGTTCTTAGAGAAGCATTTTCTCAGACTGAAGCTTGCATGAATCACTATTATGAGGGTTGTACTGCCACGGTGCTCTTAGTATGGACTGATAGTGATGAAAATTACTTTGTGCAATGTGCGAATGTTGGGGACTCTGCTTGTGTTCTGAGTGTTCATGGGAAGCGGATGAAGATGACAGAAGATCACAGAATAACTAGCATTTCAGAAAGACAACGAATAGAACAAGCAGGAGAACCATTGAAAGACGGGGAGACACGTTTATGTGGTGGCTTGAACCTTGCAAGGATGCTCGGTGACAAGTTCCTTAAACAACAAGACCCTCGTTTCAGTTCCGAACCTTATATCAGTGAAGTCGTCCATATAGATCAAGGAAGCAAAGCTTTTGCAGTGATGGCAAGCGATGGCTTTTGGGATGTGATTAGCACGAAGAAGGCAATCCAGCTGGTGCATCAGGCCAGGGAGAGATACTCCGGAGGTGCAGAAAACTCAGCGGAGAAGGTCGCCAATTTTTTGTTGGGGGAGGCTAGAACACTGCGTACAAAAGATAATACATCCATAATTTTCTTAGATTTTAAGGTTTCTCATAGAATCACTTGTAAAGTTGAACCATAA 1815 44.74 MWECDHFKAAFSRKPQGQANLFSHRGERAMTMAIPGSIVVLLLLMLLLLLLILLLIACKPWRFFSFSRSRTIKVPDLERPLVSDAADDTQSQTNELPRDYDLEGALQTDGHFRSSRLYGLIHKQRSPSSSPHLSQGDRSVPDVVPDHLEVISVGQTLKRTYFANQIPEIQKHSKLSPECDQLHEISSQDASHERSYLTLEVTSGPSRGVRYSIHSADTSRLPLTLGRVPPSDLQLKDSEVSGKHALIKWNLNNMKWELVDLGSLNGTLLNSQPINNPDSGSRHWGDPIELVSGDVITLGTTSKVYVHITSQIENHIPFGVGLASDPMAFRRGGKKHAMEDVCYYQWPLAGVDQFGLFGICDGHSGVGAAKSASEILPAKVATILSDPLKRERVVSLRDASDVLREAFSQTEACMNHYYEGCTATVLLVWTDSDENYFVQCANVGDSACVLSVHGKRMKMTEDHRITSISERQRIEQAGEPLKDGETRLCGGLNLARMLGDKFLKQQDPRFSSEPYISEVVHIDQGSKAFAVMASDGFWDVISTKKAIQLVHQARERYSGGAENSAEKVANFLLGEARTLRTKDNTSIIFLDFKVSHRITCKVEP 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1416815 1423470 - Carg05436-RA Car17g00230 164602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00230 604 Pfam Protein phosphatase 2C 327 585 IPR001932 -
Car17g00230 604 ProSiteProfiles Forkhead-associated (FHA) domain profile. 223 274 IPR000253 GO:0005515
Car17g00230 604 Pfam FHA domain 224 299 IPR000253 GO:0005515
Car17g00230 604 ProSiteProfiles PPM-type phosphatase domain profile. 319 592 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01038 Car17g00230 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00230 Car-Chr17:1416815 Car09g00337 Car-Chr9:1867742 3.20E-21 dispersed
Car17g00230 Car-Chr17:1416815 Car08g01038 Car-Chr8:7100785 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00230 K01090 - csv:101217195 988.023