Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00315 ATGGGATCGGAGCAGTTGGTGGATGGAGGCGGGCCTCGATACGTTCAAATGCAATCGGAGCCGCCTACGGCTACGATGTCGTCGTTCTTCTCGTTTCATCACGACGCTCCTGAGCCGACTAGGATTTTCGATGAGTTGCCGAATGCCACAATCATTTCCGTTTCTCGCCCTGATGCCGGCGATATTAGTCCCATGCTTCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTCAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTTTATTTGCATTTTGCATTAAAGAAACGGGCGTTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATCGGAGATCACACAGCAGTGCCCCAAGATGAGGATGGACCGGATGACGAGGCTGATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCATCCAGTGCTGCCCTGCCTATCATTCATCCTGCCTTAGGGAGGCAGCAGTCTATGTCTGATAGGGCTAAGAATGCAATGCAAGGGTATTTGAATCACTTTTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTGTCATTTTCACCAGAATATGGCCCAAAGTTGAAGGAGGATTATGTCATGGTGAAGCATCTACCTAAAATTGCAAAGGAAGATGACGCTAGGAAATGTTGTCTATGCCTACGGTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGATTCTTGGCCTTGTTGGGAGATCCATTTGATACTCAACCAATGGATATTATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGACGGACGAGTATCTTTGGCTAAGGAAATTAAGGAGCGAAATCCGTTACGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCAAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATTAACGATGCTGGACTGAGGCCTCCTGAGGGATGGTGTCATCCTCATCGTTTCGGTTCTTATGCACCACCAAGGGGTTTGACTGAAGATGGTAGTAAGGCTCAGTGGTTCATCGATGGCCTAGCAGCGTTTGAAGCTATTTCCGTTTCCATTGAACGGGCAAAATCAGAGATTTTCATTTGTGGTTGGTGGCTTTGCCCAGAATTGTATTTGCGGCGTCCTTTTGTTTCAAATGCTTCGTCTAGGCTCGATGATTTACTTGAAGCGAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTCGGCATCCATGAGAATGTGAGAGTATTACGTTACCCTGACCACTTCTCTAGTGGCGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTACGATACACCCGAACATAAAGTTGGTGATTGTCCTCCTTCGGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAGAGATGAGTTGGATCGCAGGAAATATCCCCGGATGCCATGGCATGATGTCCACTGTGCACTTTGGGGGCCACCATGTCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAACGAGCAGGCAATTCCGTTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATAGCCGAGAGTTGGAGGTTGAAAAGAAGAGTTTTGACAATTCTAGAGGAACAACAATTCAGGATTCATTTTCTCGTGGATCATCTTTCCAGGATATTCCATTGCTTTTGCCTCAAGAGGCGGATGGACCCGATGCTGAAAATGAAGGTCCAAAATTAAACGGACTGGTGCCCGTTGGCAGTCCCCTAGATCAGCCAAGTAAGATCAGCAGCAGTCTTCCTTTCTCTTTCAGGAAGATCAAAGTTGAACCCATAGGATCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTTGACCATTTGGATTCCCATGGAAAGTCGTCTGGAGATGGGAAAACACATCATCATGTCAAAAGCTCGGAGTTTGAGTGGTGGGAAAAACAAGATAGGGAACATCATGGTGGCTTCACAGATGAATCTGGACAAGTTGGTCCATGCGCTTCATGTCGTTGCCAGGTCATAAGAAGTGTCAGTCAGTGGTCTGCTGGGACAAGCCGAACTGAAGACAGCATTCACATTGCATATTGCTCTCTTATTGAGAAAGCAGAACATTTTATCTATATTGAGAATCAGTTTTTTATATCAGGCCTCGCAGGAGATGAATCAATACGGAACCGTGTGTTAGAAGCACTCTACCGTCGGATAATGAGAGCCCACCGTGAAAAGAAGACGTTTCGGGTTATTGTTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGCGGTGCAGCATCGGTTAGAGCTATAATGCATTGGCAGTATCGAACTATATGCCGAGGACCAAATTCCATGATGCATAATCTTTATGATCTTCTTGGTTCAAAAGTACAGGAGTATATATCATTTTATGGCCTCAGATCTTATGGTAAACTCTTTGATGGTGGTCCTGTAGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATTATCGATGATTGTATCGCTTTGATTGGATCGGCTAATATCAACGACAGGAGTTTACTCGGTTCCAGGGATTCTGAGATTGCTATTGTTATTGAAGATAACGAACTCATCAATTCATATATGGGAGAACAACCATGGAAAGCAGGAAAGTTTTGCTGGAGTCTCCGCCTTTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCTGGACAGATCGATCAAATAGTTGACCCAGTTGCTGATTCAACTTACAAGGATACTTGGATGGCAACTGCTAAGACAAACACAGCAATATACCAAGACGTTTTTTCTTGCCTACCGAGCGACCTCATAAACTCCAGAGCTGGATTGAGACAGAGCGTGGCGATGTGGAAGGAGAAACTCGGGCACACAACAATAGACTTAGGGATTGCACCAGAGAAGCTCGAGGTTTACAAGAATGGAGAAATTGAAAAGATTGATCCAATGGAGAGATTAAGTTCAGTGAAAGGGCATCTTGTTTCCTTCCCATTGGAGTTCCTGAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA 3342 43.75 MGSEQLVDGGGPRYVQMQSEPPTATMSSFFSFHHDAPEPTRIFDELPNATIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGDHTAVPQDEDGPDDEADPLHHDESSKNRDVPSSAALPIIHPALGRQQSMSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAKEDDARKCCLCLRFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSYAPPRGLTEDGSKAQWFIDGLAAFEAISVSIERAKSEIFICGWWLCPELYLRRPFVSNASSRLDDLLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMRDELDRRKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNSRELEVEKKSFDNSRGTTIQDSFSRGSSFQDIPLLLPQEADGPDAENEGPKLNGLVPVGSPLDQPSKISSSLPFSFRKIKVEPIGSDMPLKGFVDDLDHLDSHGKSSGDGKTHHHVKSSEFEWWEKQDREHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSRTEDSIHIAYCSLIEKAEHFIYIENQFFISGLAGDESIRNRVLEALYRRIMRAHREKKTFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPNSMMHNLYDLLGSKVQEYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELINSYMGEQPWKAGKFCWSLRLSLWSEHLGLRPGQIDQIVDPVADSTYKDTWMATAKTNTAIYQDVFSCLPSDLINSRAGLRQSVAMWKEKLGHTTIDLGIAPEKLEVYKNGEIEKIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1962053 1972397 + Carg05521-RA Car17g00315 164687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00315 1113 MobiDBLite consensus disorder prediction 123 153 - -
Car17g00315 1113 Coils Coil 98 118 - -
Car17g00315 1113 Pfam PLD-like domain 783 959 IPR025202 -
Car17g00315 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 910 937 IPR001736 GO:0003824
Car17g00315 1113 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Car17g00315 1113 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Car17g00315 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01119 Car17g00315 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00315 Car-Chr17:1962053 Car03g00601 Car-Chr3:5595886 9.40E-20 dispersed
Car17g00315 Car-Chr17:1962053 Car05g00963 Car-Chr5:9219198 0 wgd
Car17g00315 Car-Chr17:1962053 Car08g01119 Car-Chr8:7572827 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00315 K01115 - csv:101211856 2135.53