Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00347 ATGCTCCGGGGATTGATGAATCTGCTCTCCCTTTGCTGGAAGCCGTTCGGGCATGCTACTGAGAATTTGAGCTCTGTTGGAGTAATTGGAACCACTTGTGGTGGCAAAGATACTAAGGATAGCTTGCTCTGGTTCTATGATTATGGTAAGTATGCTTCCGGTGAATTTTCCATGGCTGTCGTACAGGCCAACCAAGTGCTTGAAGACCAGAGCCAGATTGAATCTGGTCCTTTTGGCACTTTCGTCGGAATCTACGATGGCCATGGCGGCCCCGATGCTGCTCGATATGTCTGCGATAATTTGTTTAGGCGTTTCCAAGATGAACAACGAGGAGTTGTGACTCGTGAAACCATTCTGAATGCTTTTCGTCGAACAGAGGAAGGGTTCACAGCCGTTGTGTCAGACTTGTGGAATACTCGGCCCCAGATAGCAACAGTTGGGACGTGCTGTCTAGTAGGGGTGATACATGAGCAGACACTCTACATTGCGAGTCTAGGAGATTCTCGTGCCGTGTTAGGGAAGAAAGTTGGCAACACTGGGGAGATTGCTGCCATTCAGTTATCAACAGAGCATAATGCAAATCTTGAGGATATCAGGCAAGAATTAAGAGACATGCATCCCAATGATCCTCAAATTGTGGTTCAAAGGCATGGAGTTTGGAGAGTGAAAGGAATTATACAGGTTTCTAGATCCATTGGCGATGTGTATATGAAACATGCTCAGTATAATAATGAAAGAATCAATGCTAAATTTAGGCTTCCGGAACCAATAAATAAGCCTATATTGACTGCTGTACCTACGATTATTGCTCATCCTCTTCACCAAAACGATTCGTTTCTCATATTTGCATCCGATGGACTTTGGGAACACCTAACCAATGACAAAGCTGTGGAGATTGTCCATAATCATCCACGTGCGGGAAGCGCGAAAAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCTAGAAAACGAGAGATGCGATATTCAGATCTCCGAAAGATCGATAAGAAGGTTCGGCGTCATTTTCATGATGACATTAGTGTTATTGTTTTATTTTTCAACCACGACCTCATATCCACAAGCAATGTCCTCCTAGATCAGCCATTATCAGTAAGAAGTGCTCTTGATCATTGA 1134 44.53 MLRGLMNLLSLCWKPFGHATENLSSVGVIGTTCGGKDTKDSLLWFYDYGKYASGEFSMAVVQANQVLEDQSQIESGPFGTFVGIYDGHGGPDAARYVCDNLFRRFQDEQRGVVTRETILNAFRRTEEGFTAVVSDLWNTRPQIATVGTCCLVGVIHEQTLYIASLGDSRAVLGKKVGNTGEIAAIQLSTEHNANLEDIRQELRDMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYMKHAQYNNERINAKFRLPEPINKPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNDKAVEIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLISTSNVLLDQPLSVRSALDH 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2171435 2176398 + Carg05553-RA Car17g00347 164719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00347 377 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car17g00347 377 ProSiteProfiles PPM-type phosphatase domain profile. 52 353 IPR001932 -
Car17g00347 377 Pfam Protein phosphatase 2C 80 323 IPR001932 -
Car17g00347 377 Coils Coil 374 377 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01149 Car17g00347 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00347 Car-Chr17:2171435 Car07g00667 Car-Chr7:3388579 6.11E-158 dispersed
Car17g00347 Car-Chr17:2171435 Car08g01149 Car-Chr8:7731068 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00347 K01102 - csv:101207284 711.449