Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00402 ATGGACGTGGGTTTGGGTTTGGTTATTGTAATGGCGGTGACGGCGTATCTTCTGTGGTTTACGTTCATTTCCCGGTCGTTGAAAGGGCCTCAAATGTGGCCGTTGCTGGGCAGCTTGCCGGGGTTGATCGAGAATTGCGACCGTTTACACGACTGGATCTCCGACAACCTCCGTGCTTGCGGCGGCACTTATCAAACATGCATTTGGGCCTTCCCTTTCTTCGCTACAAAACAGGGTCTCGTGACTGTCACGTGCGACCCGAGAAATCTGGAGCATATACTAGTTACTTGGCCAAGGACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGTCCTATTCTTAAACAAGCCGAGCTTAATTCTCAGCCGATTGATCTTCAGGATGTGTTGTTGCGCCTTACTTTTGATAATATTTGCGGCTTGGCTTTTGGGAAAGATCCTATGACTTGCGCGCCGGGTTTCCCTGAAAATGGCTTTGCTATGGCTTTTGATCGAGCCACTGAAGCTTCGTTGCAACGGTTTATTTTGCCGGAGGTTCTTTGGAAATTTAAAAAGTGGCTTCGGCTTGGTATGGAAGTCAGCTTGAGCCGGAGTCTCGTTCATATCGAGGAGTATTTATCCAGTGTTATTGATTCACGTAAGCTCGAGTTGCTGAATCAGCTTAAAGACTCGACCCCACATGATGATTTATTGTCACGTTTCATGAAGAAGAAGGAAAGTAATTACTCCAACGCGTTTCTTCGCCATGTGGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCACTGAGCTGGTTCTTCTGGTTGGTGACATTAAACCCACAAATTGAAGAAAAAATCCTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGCAATAATATCCAATCATGGCTGGATGAGCCGTTAGGATTTGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTTAGACTGTACCCGTCGGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACATTCTTCCCGACGGAACATTCGTTCCGGCGGGATCGTCGGTGACTTATTCCATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTCGAATTCCGGCCGGAGCGGTGGCTGACGGCGGACGGGAAGAAATTCATACCATACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCAAGGATCTGCTTGGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTACTTCTCCGACACCGGCTGACGGTGGCGGCAGGGCATAAGGTGGAGCAGAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGAGTTGGAGGGAATAGTGGAAAGCATAAGGGGCAAAAACGGAAATTCACAAGGGAATGATACTCCGTTAGTCGCCGTTGTGAACTGTAACGGCGGGTGTAACGGTTTTAACGACGTACAACGCTAA 1530 49.67 MDVGLGLVIVMAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFATKQGLVTVTCDPRNLEHILVTWPRTLRQAMARWVSRAIKLRFCPILKQAELNSQPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQLKDSTPHDDLLSRFMKKKESNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPQIEEKILREICTVLIETRGNNIQSWLDEPLGFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRELEGIVESIRGKNGNSQGNDTPLVAVVNCNGGCNGFNDVQR 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2676103 2677702 - Carg05609-RA Car17g00402 164774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00402 509 Pfam Cytochrome P450 116 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car17g00402 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00402 Car-Chr17:2676103 Car17g00937 Car-Chr17:7680593 2.50E-124 dispersed
Car15g01112 Car-Chr15:8779782 Car17g00402 Car-Chr17:2676103 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00402 K15398 - csv:101221526 948.347