Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00403 ATGTCTAAAGAAGAAAGCTCGAAATCTAACAGAAGGACAACCCGGTCCTCGGCAGCGGCTGTTCTAAGGGATTCCGGTGAAACTAAGAAGACATATCATCCACATATTCCAACTCTTAATGATCTTGTTTTTGGAGAAGATACCATTAGTAAGGAAGATCTCCTATCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCATCGGGAAAAACCAGTGTCATTCTACAGACATTCCGTCATCTTAACCGTCCTTTTGTCTATTCAAGCTGTCGCACTTGTTATAATTTACGAACTCTATTTGAGTCTATCTTGAATCAGTTATTACTTCATCAAAAAGATGCAGGCAGTGGATATTTGAGTGCAAAGCGCTGCGAAAAGCCATCAGATTTCGTTAACTTTCTTCGTGAAGCCTTGGTTAAAGTCGTAAATACTCTTCAGGGAAACCCAGGAAAGCTAAGCACCAAGAAGTTGACAGGACAAGGGCATGGACATATGATCTACCTGATTTTCGACAACTTGGAACTCGTTAGAAACTGGGACAAGAGTTCAAGCATACTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCACCTGACACATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGACGATCTTCGTCAAATTCTTTCGAGGAATCAAACTAATCAAGAGATGTATTCATCCTTTCTGAGTATTGTATTGGGGCCATTCTGTAGAATTACTAGACAAGTGAATGAGTTATCCATAGCCTTTTCATCATTGTATAAAACGTACCGTGAAGCATCGGGTGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGGCACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCAGCCTTCTGAACTTAATAATTTAAAGGAACCAAAGAGAAAAGGTGGCAGTAAGAAACTTGGTGGGTTTGACTCTTCTGAGGACTTGGACTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCTTTTCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCGCTAGTAGTCGAAAAAGGAAGAAGAGGCCATCTGAAAAGGCAATTGAGCAGAAGGAAATTTCAGAACAGGAGCTGCTAATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTTGCAGAAACCTCGCTCGAAGATGTGCAAGATGTTGTAATGGATAGTCGAAATGAGGATAGCGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTCAAAGGAGGAAGTTGCCCACTAGAAGGTTCTACACGATATCGCTCTACAGTGTCTGAAGATATGGCTTCGAAGGTGGCAAGGAGTATTAAGTTTCCCCTCTCCAAATACATGTACAGAAGATAA 1608 40.86 MSKEESSKSNRRTTRSSAAAVLRDSGETKKTYHPHIPTLNDLVFGEDTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSSGKTSVILQTFRHLNRPFVYSSCRTCYNLRTLFESILNQLLLHQKDAGSGYLSAKRCEKPSDFVNFLREALVKVVNTLQGNPGKLSTKKLTGQGHGHMIYLIFDNLELVRNWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLEPIPVYFSEYTEDDLRQILSRNQTNQEMYSSFLSIVLGPFCRITRQVNELSIAFSSLYKTYREASGDLNNVPNESSKRARFSHFQPHIAPALNQIFKISSQPSELNNLKEPKRKGGSKKLGGFDSSEDLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGASSRKRKKRPSEKAIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAETSLEDVQDVVMDSRNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMASKVARSIKFPLSKYMYRR 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2685181 2688555 - Carg05610-RA Car17g00403 164775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00403 535 MobiDBLite consensus disorder prediction 408 423 - -
Car17g00403 535 MobiDBLite consensus disorder prediction 400 423 - -
Car17g00403 535 MobiDBLite consensus disorder prediction 1 33 - -
Car17g00403 535 Pfam AAA ATPase domain 58 217 IPR041664 -
Car17g00403 535 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 248 532 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00403 K02607 - csv:101223023 914.45