Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00412 ATGACTTGTCTTCTTAGAAACCAAGTTAACCATGGCGGCATTCTCCTCCTCCTCCTCCTCCTCTCTCTGCCACTTCTCTCCGTCGCCCTCTCCGACGCCGAAGCTTCATTTATCGTTCGCCGCCAACTTAAATCTTTAGAAGATTACGAAAACCTCCCAGATGACTTCACATACGAACTCGACATTCCCGACACTTTCCCTAATGAGAGGTTGAAAAAGGCCTACGTTGCCCTTCAAGCTTGGAAATTAGCCATTTACTCCGACCCTTTTAACATGACCGCCAATTGGGTTGGTGCCGATGTCTGCTCTTATGTCGGCGTCTTTTGTACCACGGCGCTTGATGACTCAACCATTGAAGTTGTCGCCGGCATTGATTTGAACCATGGCGATATTGCCGGCCATTTGGTGCCGGAATTAGCCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCCAATAGATTCTGTGGGATCGTTCCTCGTAGCTTCTCCAAGCTCACCCTCATGTTTGAATTTGATATCAGCACCAACCGCTTTGTCGGCCGTTTCCCTGAGGTTGTTCTCGAATGGTCCGTCGCTAAGTACCTCGATCTCAGGTTCAATAACTTCGAAGGAGAAATCCCACCTGCTCTGTTCACCAAGGAATTCGATGCCATTTTCTTAAACAATAACAGATTCAATTCCTTCATCCCACATACCATCGGAAACTCCACCGTCTCCGTCGTGTCCTTCGCCTACAACGAATTCCATGGCTGCATTCCTAACACCATCGGCCATATGCCCAACCTCAACCAGGCCCTCTTTCTCGGCAACAACCTCAGCGGGTGTTTCCCTTACGAGATGGGGCAGCTTGTGAATATGACACTTATTGATGTTAGTGACAATTTGTTTGTCGGCGAGCTGCCTAAATCGTTGCCGGGGCTGCATAGTTTGGAGGTTTTGGATGTTAGTAACAATGAATTGAGGGGCTCTGTTTTTGGTGGTGTTTGTGAGTTGCCTAAATTGATTTACTTTAATTGTTCGAGTAATTATTTTAGTGAGGAAGATGCGGCGTGTGTTGGGTCTAAAGAATCTAAGAATTCTTTTGATGATGTTGGGAATTGTTTGGGGAATCGACCGGGGCAGAGAGATGCGGCCAAGTGTAGCTCTGTTTTGGATAAACCCATGGAGTGTGGTGGTTGTGCTGATGATCCATTTGTTCAGTCTCCATCGCCCAGGTTTAGGCCGCCGCCGTCACCATCTGTGGGTGAAATCCCTTACGTAGAAGTTGGGTCTCCACCATCTCCGATTGTGTTTCCACCGCCAACATCTCACACACGAACGCCCTCTGTTCCATCCTCACCGCCACCAGTCCACTCTCCACCACCGCCCGACCAGTCTCCACCACCCCCCGTCCAGTCTCCACCACCCCCCCTCTACTCTCCGCCACCCCCCCTCTACTCTCCGCCACCTCCCCCTCTACCCTCCGCACCTCCTCTACTCTCGCTCCCCCGTCTACTCTCCGGCCTCCCCGTCTACTCTCCGCCACCTCCCGTCTACTCTCCGCCTCCCCCCGTCTACTCTCGCCACCCCCGTCTACTCTCCGCCACCCACGTCTACTCTCGCACCCCGTCCTACTCTCCGCCTCCCCGTCATCTCTCCCGCCACCTTCCGTCTACTCTCCGCCCCTCCGTCTACTCTCCGCCACCCCCCGTCTACTCTCCGCCACCTCCCGTCTACTCTCCGCCACCTCCCGTCTACTCTCCGCCACCTCCCGTCTACTCTCCGCCTCCCCCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCACCACCAGAACAATCTCCGCCACCACCCGTACACTCTCCCCCCCCACCCGCTTTACTCTCGCCACCACCCCTACACTCCTCCCCCCCACCCGTTTTACTCTCCACCCCCACCAGAACAATCTCCACCCCCACCCGTTTACTCTCCACCGCCACCAGAACAGTCTCCACCCCCACCTGTTTACTCTCCACCGCCACCAGAACAATCTCCACCTCCACCCGTTCACTCTCCACCGCCACCAGAACAATCTCCACCTCCACCCAACAATCTCCACCTCCACCCGTTCACTCTCCGCCCCCACCCGTTTACTCTCCACCGCCACCAGAAAAATCTCCGCCCCCACCCGTTCAATCTCCGCCGCCACCAGAACAATCTCCGCCGCCACCAGAACAATCTCCGCCACCCGTTCAATCTCCGCCCCCGCCAGAACAATCTCCGCCCCCACCAGAACAATCTCCGCCCCCACCAGAACAATCTCCGCCGCCACCAGAGCAATCTCCACCTCCACCAGAACAATCTCCACCTCCTGCTCCCGATTCTTCTCCACCGCCAGCGTTCGAGGACTTAATTCTCCCACCAAATATCGGCTTCCAGTATTCATCGCCGCCTCCACCACAGTTTCCGGGCTACTAA 2442 54.87 MTCLLRNQVNHGGILLLLLLLSLPLLSVALSDAEASFIVRRQLKSLEDYENLPDDFTYELDIPDTFPNERLKKAYVALQAWKLAIYSDPFNMTANWVGADVCSYVGVFCTTALDDSTIEVVAGIDLNHGDIAGHLVPELALITDLALFHINSNRFCGIVPRSFSKLTLMFEFDISTNRFVGRFPEVVLEWSVAKYLDLRFNNFEGEIPPALFTKEFDAIFLNNNRFNSFIPHTIGNSTVSVVSFAYNEFHGCIPNTIGHMPNLNQALFLGNNLSGCFPYEMGQLVNMTLIDVSDNLFVGELPKSLPGLHSLEVLDVSNNELRGSVFGGVCELPKLIYFNCSSNYFSEEDAACVGSKESKNSFDDVGNCLGNRPGQRDAAKCSSVLDKPMECGGCADDPFVQSPSPRFRPPPSPSVGEIPYVEVGSPPSPIVFPPPTSHTRTPSVPSSPPPVHSPPPPDQSPPPPVQSPPPPLYSPPPPLYSPPPPPLPSAPPLLSLPRLLSGLPVYSPPPPVYSPPPPVYSRHPRLLSATHVYSRTPSYSPPPRHLSRHLPSTLRPSVYSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPEQSPPPPVYSPPPPEQSPPPPVHSPPPPALLSPPPLHSSPPPVLLSTPTRTISTPTRLLSTATRTVSTPTCLLSTATRTISTSTRSLSTATRTISTSTQQSPPPPVHSPPPPVYSPPPPEKSPPPPVQSPPPPEQSPPPPEQSPPPVQSPPPPEQSPPPPEQSPPPPEQSPPPPEQSPPPPEQSPPPAPDSSPPPAFEDLILPPNIGFQYSSPPPPQFPGY 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2744096 2746620 + Carg05619-RA Car17g00412 164784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00412 813 MobiDBLite consensus disorder prediction 503 522 - -
Car17g00412 813 MobiDBLite consensus disorder prediction 635 693 - -
Car17g00412 813 MobiDBLite consensus disorder prediction 556 634 - -
Car17g00412 813 MobiDBLite consensus disorder prediction 694 792 - -
Car17g00412 813 MobiDBLite consensus disorder prediction 426 493 - -
Car17g00412 813 MobiDBLite consensus disorder prediction 426 813 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00780 Car-Chr8:5110909 Car17g00412 Car-Chr17:2744096 0 dispersed
Car09g00168 Car-Chr9:835696 Car17g00412 Car-Chr17:2744096 7.17E-146 dispersed
Car17g00412 Car-Chr17:2744096 Car05g01248 Car-Chr5:11663486 9.66E-122 dispersed
Car17g00412 Car-Chr17:2744096 Car08g00779 Car-Chr8:5095935 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00412 - - cpep:111806609 781.941