Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00447 ATGAAGGCCATGCCCTTTCCTTACCCTTTTGATGACTTTCGTCCAAATGGGGTTTTGAATTTTTCCTCTGTTTCCGATTCTTCGCCGCCTCCCTTCCGCCGTCACAACCACCGTCAACACTGGAGTTCTACTGATAACACTAATCTGCTCAAACAGATTTGCTATGTGGGTGCTGCTGAACCCACCTCTGTTCTCGACACTAGAAGAAGCCCAAGCCCTCCCACTTCCACTTCCACACTGTCTTCCTCTCTCGGCGGCGGCTGCGGCGGCGGCGGCGGTGGTGGTGGTACTGCCTCCACCGACACTACCGTGGCGGCGCCGCAGTCTTCTCTCCCTGAAAACCCTTCTCCTTTAGATAAATGTGGCGGCGGAGGCGGCCTTGGAATGGATGATTGGGAGAGCGTTTTGCCGGAATCCCCTGGGCAAGGACCCTCCATTCTTGGGTTAATTATGGGTGATGTGGAAGACCCATCTCTTGGATTGAATAAACTCCTGCAGAGCGGCGGTGGCGGTGGCGGTGTTGGTGGTGGTGGTGATTCTCATCTGGACTTGGAATTCTCCGGGAGTTTTTCCGGTGTCGATCATGGGTTGGTCTTCGAACCCAATACTCTCGCCGGTGAGTCCATTGTCGACCCTTCTCTTCAAGCCCCATCTTATGCTAGACTTTCCGCCGCCGTGTCCAACTCGAACGCCATGTTTTCCGGTGTATTTCAGAATCAAAATCAGCTGTCGGAAACCGTTGACGAGAAGCCACAGATTTTCAATTCTCCCCAAGTTATGATGAATCAAAATCAAACCCAGTTCACTCATAATCCACCTCTGTTTATGCCTCTTCCTTTTGCCTCTCCCGGCCAAGATCACCACCAGAACCACCACCACTTCCTCGGCGGTGTCCCGCCGACAAAACGGTTCAATTCCGGTCCGATTCCACCAAATTATCCAGTGAAATCACCATTTCTTGATTCGGGTCAAGAAAATATCAATCGCAGACAACAACAACAACAGCCCCAACAAGTTCAGTTGTTTCCTCATCAGCAGCAGAGGCCATCCATGGCGGCCTTAGCCAAACAAAAAATGGTGAATGAAGACATAGCGAATCAACAACTCCAACAGGGCATCTCCGACCAGCTATTCAAGGCCGTAGAGCTGATCGAAACAGGCAATTCAGTTCTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTTCCCCTATTGGGAAGCCCTTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCCTTGCAATCGCTCCTTCAAAACCCATCAAACCCCTCCAATCCTTCCCCTCTCAGCATCATTTTCAAAATCGCGGCCTACAAATCCTTCTCCGAAGTCTCCCCTGTTCTCCAATTTGCCAATTTCACCTCAAACCAAGCCCTCCTTGAGGCCTTTAACGGCTCCGGTCGGATTCACATCATCGACTTCGACATCGGCTACGGCGGTCAATGGGCTTCTCTAATGCAGGAGCTTGCCTTAAGAGGACCCCCATTTCTCAAAATCACTGCCTTTGCTTCCACTTCCACACACGACGATTTTGAGCTCGGTTTCACTCAAGAAAACCTCAAGAATTTCGCTAACGATCTCAACATTGGATTCGAGCTCGAAATCATAAACATCGAGTCTCTCAATTCTGGTTCATGGCCTCTAGCTCTTAATGTCTCTGAAAACGAAGCCATTGCAGTGAATCTCCCCGTTGGTTCCCTTTCATTGCCAATGATCCTCCGTTTCATAAAGCATCTTAACCCTAAAATCGTAGTGTCTGTCGACCGAGGCTGCAGCCGAGTCGATGCGCCATTCCCCCACCGTGTTATCCACGGTCTGCACTCATACTCGGCGCTGCTCGAATCCATGGAAGCTGTAACAGTGAATATGGATGCCCAGCTGAAAATTGAAAGGTACTTGGTGCAGCCATGTATCGAAAAAGTGGTGACGAGTTCTCAATGTTCGAACGAGAGGCTTCCGCCATTGAAATCGATGTTTTTGTCATCCGGGTTTTCGCCATTGACATTCAGTAACTTCACGGAGTCGCAGGCGGAGTGTCTGCTGCAGAGGACGCCAGTTCAGGGGTTCCATATCGACAAGAGACACTCATCTCTTGTTCTATGCTGGCACCGGAAGGAGCTCGTTTCAATCTCTGCTTGGAGGTCTTGA 2175 50.57 MKAMPFPYPFDDFRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGGGCGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTKRFNSGPIPPNYPVKSPFLDSGQENINRRQQQQQPQQVQLFPHQQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSNPSNPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCSNERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3024157 3026331 + Carg26709-RA Car17g00447 164819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00447 724 MobiDBLite consensus disorder prediction 62 131 - -
Car17g00447 724 MobiDBLite consensus disorder prediction 96 115 - -
Car17g00447 724 MobiDBLite consensus disorder prediction 21 43 - -
Car17g00447 724 MobiDBLite consensus disorder prediction 65 85 - -
Car17g00447 724 ProSiteProfiles GRAS family profile. 364 723 IPR005202 -
Car17g00447 724 Pfam GRAS domain family 375 723 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00693 Car17g00447 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01079 Car-Chr16:9265873 Car17g00447 Car-Chr17:3024157 2.25E-137 dispersed
Car16g01082 Car-Chr16:9296213 Car17g00447 Car-Chr17:3024157 1.37E-69 dispersed
Car17g00447 Car-Chr17:3024157 Car04g02872 Car-Chr4:21709645 9.01E-41 dispersed
Car17g00447 Car-Chr17:3024157 Car08g00747 Car-Chr8:4852654 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5043 PF03514 GRAS 6.10E-93 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00447 - - csv:101214718 1139.41