Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00515 ATGGGCAAAAACGACGGAGAACAGCCACCGCAGTCCGCCGTCGGCTCCAGGCCATCAGGCCAAGCTTCCGATGGCCGATTCTGTTGTGGGTGTGTTTCGATTCGAAGCCTCATTGGCTTTAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTGGGCTTCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTCATAAATCCCCGTATCGAGGTCATGATATATTAGCAACATTCAACGTTGAGAGACCCGTTTCTTTGCTGAGAGACAATGTCGAGCAGCTCCAAACCGACATTTTTGAAGAGTTCCCTATACCGTCTATCAAAGTGGATGTACTATATCTAGATTCGTTATCTGGATCAAACTGTACGAAAGTTGTGTTCAGCCTCGATTCAGATACGGATGATTCAGAAATCTCGCAGACTTATCTAAGTTTAATCAGGTCGACGTTTGCAAGTCTAGTAACGAATCAGTCGTTCCTCCATGTTACCAAATCCATGTTCGGGGAGGCCTTTTCGTTTGAAGTACTGAAATTCCCGGGAGGAATAACGATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACATTGAACTTCTCTGTTCATCAGATTCAAGTTCACTTCGGTGAACTGACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCGTATGAGATCTTATATATTAAACTATGGAATGCGGAAGGTTCAACCGTGACTGCCCCTACGATTGTCCAGTCGTCTGTTCTTTTGGAAGTCGGAAATACTCCATCGATGCGACGACTGAAGCAGCTAGCTCAAACAATATCGGGTTCTAATTCTAGTAACCTCGGCCTGAATAATACAGAGTTCGGAAAAGTTAAGCAAGTTCGCCTTTCCTCGATTCTTAAACACTCCCTCAATGGCAGTGACGGGAACAGCCCTGTAAGGTCACCTTCTCCCGCTCCCGCTCCCGCTCCTACACCCCATCCCCATAACTACCATCATCCCCCGACTCGCCACCATCACACCCCTCTTACGCCTGCAATTTCACCTGCCCCTACAACCGAGAAGGGCGCACCGAAATACGGTTCCCCTGCCCCTGAAAGAACAGCAGCATCACCTAAGAGAAGTTCCGAGGCAGAGCCGCCCGGTTGTCAATATAGATACAAGAGGAAGTCCGGTAGAAAAGAAGGAAAGCAATCTCCTGTTCAATCTGCTCCATCACCATCGCCAAAACATCGAGTCGTCTCTCCAGCTCCATTACCAAACGTCATTTACAGTCACGTTCAACCACCGTCAAAAAGCAACTCCAACCACCACGAAACATCGACGACGAATCCATCATTTGCACCATCGCCATTGCCATCCCCATCTGGTGCAGATCGTGATCGAACGATCACGCAATGGGGATTCACACTGTTTCTGATTCTCGCACACCATATGTAG 1476 47.7 MGKNDGEQPPQSAVGSRPSGQASDGRFCCGCVSIRSLIGFRCIFILLLSVALFVSAVFGLPPFLHYADQKDLGHKSPYRGHDILATFNVERPVSLLRDNVEQLQTDIFEEFPIPSIKVDVLYLDSLSGSNCTKVVFSLDSDTDDSEISQTYLSLIRSTFASLVTNQSFLHVTKSMFGEAFSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSVHQIQVHFGELTSQLEAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGSDGNSPVRSPSPAPAPAPTPHPHNYHHPPTRHHHTPLTPAISPAPTTEKGAPKYGSPAPERTAASPKRSSEAEPPGCQYRYKRKSGRKEGKQSPVQSAPSPSPKHRVVSPAPLPNVIYSHVQPPSKSNSNHHETSTTNPSFAPSPLPSPSGADRDRTITQWGFTLFLILAHHM 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4645786 4649762 + Carg26129-RA Car17g00515 164887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00515 491 MobiDBLite consensus disorder prediction 1 24 - -
Car17g00515 491 MobiDBLite consensus disorder prediction 438 459 - -
Car17g00515 491 MobiDBLite consensus disorder prediction 314 473 - -
Car17g00515 491 MobiDBLite consensus disorder prediction 327 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00464 Car-Chr14:2431500 Car17g00515 Car-Chr17:4645786 1.31E-125 dispersed
Car17g00515 Car-Chr17:4645786 Car16g00335 Car-Chr16:2049856 4.16E-51 dispersed
Car17g00515 Car-Chr17:4645786 Car07g01080 Car-Chr7:6434960 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00515 - - bhj:120073837 716.072