Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00565 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGGCCACATGGGCCGTCGCCGCCGTCTGCTTCGTCTTGGTCTTGATTTCCATTGTCATCGAACATAGCCTGCATCTCATCGGAAAGTGGTTTAAGAAGAAGCACAAACGAGCTCTTTACGAAGCCCTTGAGAAGATCAAAGCAGAGCTGATGCTATTGGGGTTCATATCGCTGCTGCTGACGGTAGGACAAAGCCTAATCACCAATGTTTGTATACCGGAAGACGTGGCGGCCACGTGGCATCCATGTAGTCCCCAAAAGGAGGAGGAATTAAGTAAACAAGATGACGTGGTGAACTCCGACACTAATCGCCGGAAACTTCTCGCCGTCTCCCCTGTCAATGCCACTTTCCGGCGCGTCCTCGCTGGGGGCGGCGGAACCGACAAATGTGCTGCCAAGGGTAAGGTTCCATTTGTGTCGGAAGAAGGCATTCATCAGCTGCACATATTCATCTTCGTGTTGGCTGTCTTCCATGTTCTGTACTGTGTTTTAACTTTGGCTTTAGGAAAAAAAAAGATGAGAAGTTGGAAGGCATGGGAAAAGGAAACAAGAACCGTGGAGTACCAATTTTCACACGATCCAGAGCGGTTCCGATTTGCAAGAGACACATCATTCGGAAGAAGACATTTGAGTTTTTGGACCAAATCTCCTTCTCTAGTATGGATGGTTTGTTTCTTCAGACAATTTGTTCGGTCGGTTCCTAAAGTTGATTACCTGACCTTAAGACATGGTTTCGTGATGGCTCATCTGGCACCACATAGCGATCAGAAATTCGACTTCCAAAAATACATCAAACGATCCCTGGAAGAAGATTTCAAGGTGGTCGTTAGTATCAGCCCTCCAATCTGGTTTTTGGCTGTCCTCTTCCTACTTTTCAACACCCATGGGTGGAGGGCGTACCTATGGCTTCCATTTATCCCATTAATCATTGTATTACTGGTGGGAACGAAATTGCAAGTGATAATTACGAAAATGGCAGTGAGGATTCAAGAAAGAGGCGAGGTGGTGAAGGGGGTGCCGGTGGTCGAGCCAGGGGACGAGCTTTTCTGGTTCAATCGGCCTCGCCTCATTCTTTATCTCATCAACTTCGTGCTGTTTCAGAACGCCTTTCAGCTCGCTTTCTTTGCTTGGACTTGGAAAGAATTCGGGATGAAATCGTGCTTCCATGAGCACGTAGAGGATTTGGTGATTAGAATAACGATGGGGGTTCTCGTTCAAATCCTTTGTAGTTATGTCACGTTGCCCCTTTACGCTCTCGTTACACAGATGGGTTCCACAATGAAACCAACGATTTTCAACGAAAGGGTAGCAACGGCGTTAAAAAACTGGCATCACACGGCTCGCAAACACATTAAGCAAAATCAAGGTTCCATCACGCCTATGTCTAGTCGCCCACCAACCCCGTCCCACCATATGTCGCCGATGCACCTCCTCCGCCACTACCGAACCCAGTTGGACAGTGTCCACACCTCTCCCAGACGGTCCGTTTTTGACAATGACCATTGGGACCCCGACTCAACGTCGCCGTCGCATCGCTTTCACCCTCGCGACATGGAGACCGGCGGTGATGTTGAGGTTGAGACTGACCATTCAAACCAACCCAATTCAACTCAAGTCGTGGATGTAGATGTTGAACCGATGGAGATGAATAATGATTCTGAACAGCATGAGATTAAAATGGGTTCGAATGAATTTTCGTTTGACAAAAGAAATGATAGAATATGA 1761 47.98 MAGGGAGRSLEETATWAVAAVCFVLVLISIVIEHSLHLIGKWFKKKHKRALYEALEKIKAELMLLGFISLLLTVGQSLITNVCIPEDVAATWHPCSPQKEEELSKQDDVVNSDTNRRKLLAVSPVNATFRRVLAGGGGTDKCAAKGKVPFVSEEGIHQLHIFIFVLAVFHVLYCVLTLALGKKKMRSWKAWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPSLVWMVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFLAVLFLLFNTHGWRAYLWLPFIPLIIVLLVGTKLQVIITKMAVRIQERGEVVKGVPVVEPGDELFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHVEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALKNWHHTARKHIKQNQGSITPMSSRPPTPSHHMSPMHLLRHYRTQLDSVHTSPRRSVFDNDHWDPDSTSPSHRFHPRDMETGGDVEVETDHSNQPNSTQVVDVDVEPMEMNNDSEQHEIKMGSNEFSFDKRNDRI 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5237572 5240927 - Carg22593-RA Car17g00565 164937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00565 586 MobiDBLite consensus disorder prediction 500 538 - -
Car17g00565 586 MobiDBLite consensus disorder prediction 464 481 - -
Car17g00565 586 MobiDBLite consensus disorder prediction 500 549 - -
Car17g00565 586 Pfam Mlo family 8 493 IPR004326 GO:0006952|GO:0016021
Car17g00565 586 MobiDBLite consensus disorder prediction 463 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01028 Car-Chr1:9763379 Car17g00565 Car-Chr17:5237572 5.88E-126 dispersed
Car03g00574 Car-Chr3:5487864 Car17g00565 Car-Chr17:5237572 0 dispersed
Car04g01437 Car-Chr4:8327962 Car17g00565 Car-Chr17:5237572 0 dispersed
Car07g00331 Car-Chr7:1665869 Car17g00565 Car-Chr17:5237572 0 dispersed
Car07g00604 Car-Chr7:3053548 Car17g00565 Car-Chr17:5237572 9.86E-18 dispersed
Car08g00870 Car-Chr8:5818765 Car17g00565 Car-Chr17:5237572 6.92E-141 dispersed
Car13g00156 Car-Chr13:1378163 Car17g00565 Car-Chr17:5237572 0 dispersed
Car13g00158 Car-Chr13:1410225 Car17g00565 Car-Chr17:5237572 1.92E-116 dispersed
Car15g00303 Car-Chr15:1635960 Car17g00565 Car-Chr17:5237572 1.37E-123 dispersed
Car17g00043 Car-Chr17:207740 Car17g00565 Car-Chr17:5237572 5.37E-137 dispersed
Car17g00565 Car-Chr17:5237572 Car18g00811 Car-Chr18:9173318 0 dispersed
Car17g00565 Car-Chr17:5237572 Car20g00418 Car-Chr20:2354140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00565 K08472 - csv:101212018 982.63