Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00572 ATGGAAGTGCAAGATCATGGTCACATAATTGAAGTATGTGGGGATGTGCAAGCTGTAGGGCCTAGCATCGTGGGAAGTAAAATTTGTGGGGATGCACCCTCTTGTGGATTTTCTGATGCAAAAAATAGTTCAAATGATGCAAAGGAGCGAGCTGCATCCATGCGGAAGCTTTTCATAGCAGTTGTTCTCTGCATTGTTTTTATGAGTGTAGAAGTAGTGGGAGGTATTAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCCATTTCTTTGTTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCGCGTCAGTCATATGGCTTCTTCCGCATCGAAATTCTTGGTGCTCTCGTTTCCATTCAAATGATCTGGCTTCTTGCTGGAATCCTTGTTTACGAAGCTATTGTCCGACTTATCAATGGTCCGGGTGAAGTCAAGGGGTTGCTCATGTTCGCTGTGTCTGCATTCGGGTTAGTTGTTAACATAGGTATGGCTCTGCTGCTAGGTCACGAACATGGTCATGCCCATTCTCATGGTCACAGTCATGGACATGGCGAGCACGACCATGGTCATGGGAAACACGAACATGGCGGTGAAGGTCATGGGCATCATCATGGGATAAGTATTACTACGCACCACCACGACCACCATGAAGAAGGAAAGGGAGCTGCCAGCGATCATCATGCTCAAACGGAACCAGTAACGACACCCTTGCTTGAGGGTGGCTGTGAAGATGGAAGAAGTCATTCACCAAAGGTTATCAAGATGCAAAAGAAGCAACGAAATATAAATGTACAAGGGGCTTATCTTCATGTACTCGGAGATTCGATCCAAAGCATTGGGGTGATGATCGGCGGGGCAATCATATGGTATAAACCCGAATACAAGATTCTTGATCTGATATGCACCCTAATTTTCTCTGCAATTGTTCTGTGCACAACAATTCAAATGCTTCGAAATATCCTCGAGGTATTAATGGAGAGCACACCGCGAGAGATCGACGCAACAAAGCTCGAAAAGGGTTTGTGCGAGATGGATGAGGTAGTTGCAATACATGAACTGCACATCTGGGCCATAACTGTTGGGAAGATTCTACTGGCATGCCATGTTATAATAAAGCCGGAGGCTAATGCAGACATGGTATTGGATAAGGTTATTGATTATATTAGAAGAGAGTACAACATAAGCCATGTCACCATTCAGATAGAGCGTCAGTAG 1251 45.08 MEVQDHGHIIEVCGDVQAVGPSIVGSKICGDAPSCGFSDAKNSSNDAKERAASMRKLFIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSAFGLVVNIGMALLLGHEHGHAHSHGHSHGHGEHDHGHGKHEHGGEGHGHHHGISITTHHHDHHEEGKGAASDHHAQTEPVTTPLLEGGCEDGRSHSPKVIKMQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREIDATKLEKGLCEMDEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDKVIDYIRREYNISHVTIQIERQ 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5402733 5403983 - Carg28165-RA Car17g00572 164944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00572 416 MobiDBLite consensus disorder prediction 192 237 - -
Car17g00572 416 MobiDBLite consensus disorder prediction 184 241 - -
Car17g00572 416 Pfam Cation efflux family 57 337 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00571 Car-Chr1:3362317 Car17g00572 Car-Chr17:5402733 1.34E-44 dispersed
Car02g00702 Car-Chr2:5198233 Car17g00572 Car-Chr17:5402733 0 dispersed
Car14g00568 Car-Chr14:3088149 Car17g00572 Car-Chr17:5402733 1.64E-12 dispersed
Car17g00572 Car-Chr17:5402733 Car06g00085 Car-Chr6:591327 9.78E-06 dispersed
Car17g00572 Car-Chr17:5402733 Car11g00891 Car-Chr11:5542983 4.85E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00572 K14689 - csv:101213602 640.188