Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00619 ATGGCTGCTCTTCTTCGAGTGCTCTTTCTCTTCTCTATCCTCCTCCCACTTTCTTCTTCTTCAATCGATAATTCCAAGAAGACCTTCATTGTGCAGGTTAACAGAGATGCCAGCAAGCCTTCCATTTTCCCAACACACAGGCACTGGTACGAGTCCTCTCTGGCCTCCATCTCTCCCAACAAGCCAACACCGTCACAACCAGATGCTTCTGGTAGCGATGGACCCATCATTCATACATATGAAACCCTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTCAGAACCTTCAAACCCTTCCCCATATCGCCGCCGTCATCCCTGAACAGGTTCGCCATCCTCATACAACTCGTTCCCCTGAGTTTCTTGGCCTTACGACCTCTGATAGTGCAGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATCGGAGTTATCGATACTGGTATTTGGCCGGAGAGGCAGAGCTTCAATGACCGCGATCTGGGTCCAATTCCTTCCAAATGGAAAGGCCGGTGCTTGGAGTCTAAACACTTCCCAGCCACCTCTTGCAACCGTAAGCTTATTGGGGCTCGATTCTTCTGTAGTGGTTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGAATCGCTCGCCGCGTGATTCCGATGGTCATGGTACTCACACGGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCAGCTTCAACTTTAGGCTATGCTCGTGGTAAAGCGGCCGGAATGGCTCCTAAGGCCCGTCTTGCTGCCTATAAAGTCTGTTGGAACGCCGGCTGCTACGACTCTGACATTCTTGCAGCTTTTGATGCTGCCGTTTCTGACGGTGTGGATGTGGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTACTATCTCGATGCCATCGCTATTGGGGCTTTTAGAGCGGTGGCAGCCGGTGTTTTTGTCTCGGCATCAGCCGGTAACGGTGGCCCAGGTGGGCTCACTGTGACTAATGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATACTAGGTACTAGTGTCTACGGCGGACCGGCTTTGGTTCCTGGTCGTATGCATCCTCTAATTTATGCAGGAACCGAAGGCGGTGATGGGTATTCTTCGTCTCTATGCTTAGAAGGCTCATTGAACCCAAATCTAGTGAAAGGGAAGATTGTAGTATGTGATAGGGGCATAAATTCAAGGGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTAGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTAGCTGACTGCCATGTTCTACCCGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATCCGCAAATATATTGCAGAAGCAGCGAAGTCTAAGTCACCGCCAACAGCTACAATTTTGTTCAAGGGAACTCGGCTTGGAGTCAGGCCAGCACCAGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTGAAGCCTGATGTGATTGCGCCAGGATTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCCTCTGGAATTCCCACAGACAAGCGTACCACAGAGTTCAACATACTTTCCGGCACTTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCTCTGCTTAAAGCGGCACACCCAGGATGGAGTCCAGCCGCTATAAAATCAGCCCTAATGACCACAGCTTATACCTTGGACAACAGGGGTGAGACAATGTTAGACGAATCTTCAGGCAATACTTCTACGGTCTTAGACTTCGGAGCTGGTCATGTTCACCCACAAAAGGCAATGGACCCTGGCTTAATCTATGACCTGAACACATATGATTATGTAGATTTCTTGTGTAACGCCAACTACACCACTAAGAACATCCAAGTTATTACGGGGAAGATTGCAGATTGCAGCGGGGCAAAAAGGGCTGGCCATACTGGGAATTTGAACTACCCTTTATTGTCTGTGGTGTTTCAACAATATGGTAAACAAAAGATGTCTACGCATTTCATTAGAACTGTGACCAACGTTGGGGACGCTAATTCTATCTACAAGGTAACAATCAAACCACCAAGAGGAATTTCAGTGACTGTGGAGCCAGAAAAGCTGGCGTTCAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTTTAAGACTTTCCTCTGGAAGTTCTAGCATGAAGAGTGGTTCCATAGTTTGGACTGATGGAAAGCACGTAGTTACTAGTCCTTTGGTTGTCACCATGCAGCAACCCCTGCAGTAG 2364 49.28 MAALLRVLFLFSILLPLSSSSIDNSKKTFIVQVNRDASKPSIFPTHRHWYESSLASISPNKPTPSQPDASGSDGPIIHTYETLFHGFSAKLSPFEVQNLQTLPHIAAVIPEQVRHPHTTRSPEFLGLTTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGRCLESKHFPATSCNRKLIGARFFCSGYEATNGKMNETTENRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVAAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRMHPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVVCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSKSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNANYTTKNIQVITGKIADCSGAKRAGHTGNLNYPLLSVVFQQYGKQKMSTHFIRTVTNVGDANSIYKVTIKPPRGISVTVEPEKLAFRRVGQKLSFLVRVQAMALRLSSGSSSMKSGSIVWTDGKHVVTSPLVVTMQQPLQ 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5824892 5827255 + Carg18952-RA Car17g00619 164991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00619 787 Pfam PA domain 383 471 IPR003137 -
Car17g00619 787 Pfam Peptidase inhibitor I9 28 115 IPR010259 -
Car17g00619 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Car17g00619 787 Pfam Fibronectin type-III domain 676 780 IPR041469 -
Car17g00619 787 ProSiteProfiles Serine proteases, subtilase domain profile. 121 628 - -
Car17g00619 787 Pfam Subtilase family 142 609 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00619 Car-Chr17:5824892 Car20g00658 Car-Chr20:3717241 0 dispersed
Car17g00619 Car-Chr17:5824892 Car08g00711 Car-Chr8:4564134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00619 - - csv:101210434 1368.21