Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00646 ATGGGTTTGAAAAAGGCATTCCCTTTGAAACATCTGCTACCCAATTGCTTGAAGCCAAAGAAGCAGCTCACAGGGGCTGCTGAGTTTCAAACTTCAAACAAAATCTCCCTTAGAAGAATCTCATCACTTTCTGATATGAGCGTTAGATCATCTCTCTCAGTCATTACCCATCTTTCAAGCTCTTCCAACGCTTCAAATCTTCAAATTTTCACCATTAAAGAGCTTACAGAGCTCACTGGAAACTTCACCAAAAGCAACTACTTGGGTGAGGGTGGATTTGGGCCTGTGTTTAAAGGCTTCATTGATGAGCATTTCAAGCCTGGTTTGATGTCCCAGCATGTGGCTGTCAAGGTTTTGGACTTGGATGGCTCTCAAGGCCATAGAGAGTGGCTGGCTGAAGTGTTCTTTCTTGGGCAGTTGAGACACCCAAATGTTGTTAATTTGATTGGGTATTGCGTTGAAGATGAACAGAGGGTTCTTGTTTATGAATATCTTGAAGGAGGCAACTTGGAGAATTTGTTGCTTAAAGATTGTTATGTTTCGAATTTGACGTGGTTACAAAGGATGAAGATTGCATTAGGATCGGCAAAAGGGCTTGATTTTCTGCACAAAGCGGAAAGGCCGATCGTTTTTCGAGATTTCAAGGCTTCGAATATCTTACTTGACTCGGACTATAATCCCAAGCTTTCGGATTTCGGATTAGCTATAAACGATCCCAATGAAGACGATACACATATATCAACCCGAATAATGGGAACTGAAGGTTATGCAGACCCAGTATACATCATGACAGGTCATTTGTCAACAATGAGCGATGTATTCAGCTTTGGAGTGTTTCTATTGGAGTTGCTAACGGGTCGACGAGTGGTCGACAAGAGTCGCCCGAGCCGAGAACGGAACTTGGTGGCTTGGGGAAGGCATCTCTTGAAAGATCACCACAAACTTGAGAAGATCATTGATCCAAGGCTGGAGGGGCTATACTCAAATGAAGGGGCTAAAAAAGTGGCTGCAATAGCTTATAGTTGCCTTAGCCACCACCCAAAATGCAGGCCCTCAATGAGCTCAGTGGTTAAGGATTTGGAGCCTGTTCTTAACATGAAAGAGTTCTTAACTGAGCCATTTGTGTATGTTGTCCCAAGTGAAGGGATCGAAAAGGAAGACGATGTAGAGAAGAAGATGAACAAAGACGTCGAGATGGGAGGGTAA 1206 43.45 MGLKKAFPLKHLLPNCLKPKKQLTGAAEFQTSNKISLRRISSLSDMSVRSSLSVITHLSSSSNASNLQIFTIKELTELTGNFTKSNYLGEGGFGPVFKGFIDEHFKPGLMSQHVAVKVLDLDGSQGHREWLAEVFFLGQLRHPNVVNLIGYCVEDEQRVLVYEYLEGGNLENLLLKDCYVSNLTWLQRMKIALGSAKGLDFLHKAERPIVFRDFKASNILLDSDYNPKLSDFGLAINDPNEDDTHISTRIMGTEGYADPVYIMTGHLSTMSDVFSFGVFLLELLTGRRVVDKSRPSRERNLVAWGRHLLKDHHKLEKIIDPRLEGLYSNEGAKKVAAIAYSCLSHHPKCRPSMSSVVKDLEPVLNMKEFLTEPFVYVVPSEGIEKEDDVEKKMNKDVEMGG 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6046593 6048901 - Carg09427-RA Car17g00646 165018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00646 401 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Car17g00646 401 ProSiteProfiles Protein kinase domain profile. 82 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00684 Car17g00646 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00646 Car-Chr17:6046593 Car06g00152 Car-Chr6:938348 5.05E-131 dispersed
Car01g01311 Car-Chr1:11756567 Car17g00646 Car-Chr17:6046593 2.30E-124 wgd
Car10g00689 Car-Chr10:3575767 Car17g00646 Car-Chr17:6046593 5.61E-143 wgd
Car11g00610 Car-Chr11:3335484 Car17g00646 Car-Chr17:6046593 7.34E-147 wgd
Car17g00646 Car-Chr17:6046593 Car08g00684 Car-Chr8:4382033 0 wgd
Car17g00646 Car-Chr17:6046593 Car09g00319 Car-Chr9:1777465 2.43E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89478 PF07714 PK_Tyr_Ser-Thr 8.10E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00646 - - cmos:111464213 610.142