Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00662 ATGAATTTAGGAGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGAAAATGCTCGATAAATCCAAATTCTTCTTCCTCGGTGCGGCGTTGTTTTCAGGTGTTTCTGCGTCTCTTTACCCTATGGTAGTGTTGAAAACTCGACAACAGGTCGCTCATTCGCAGCTTTCTTGCATCAGAACCGCCTTCCACCTTGTCCGGCACGAAGGTTTCCGAGCTCTCTACCGTGGATTCGGGACTTCTCTGATGGGGACTATCCCGGCTAGGGCTCTGTACATGGGAGCTCTTGAGTTCACTAAGAGCTATGTAGGGACTGCCACTGTTAGAGTCGGATTTCCAGAGGCCACTGCCGCTACCATTGCTAATGCAGCTGCTGGATTGAGTGCTGCAATGGCGGCTCAGCTTGTGTGGACTCCTGTTGATGTTGTGAGTCAGAGACTCATGGTTCAATCTCGTTTCAACAATCCTAATCCTTCCTCGACTCGTTACATCAATGGAGTCGATGCATTCCGTAAGATCCTCAATGCCGATGGTATCCGAGGCTTGTATCGAGGTTTCGGGATATCAATTTTGACATACGCACCGTCGAATGCAGTGTGGTGGGCTTCTTATTATGTAGCACAGCGTTTGGTATGGGGTGGAATTGGATGCTATTACTCAAAGAAGCTTGATGAAGGCAATGAAAATGGAGGTTCAAACATTTACCGACCGGATTCCAAGACGGTGATCGCAGTACAGGGCGCGAGCGCAGCCATGGCAGGGAGTATCTCGGCTCTGATAACAATGCCCCTCGATACAATCAAGACGAGATTGCAAGTTTTGGATGGGGATGAGAATGGTAGACGAGGGCCAACAATTGGACAGACATTGAGAAATCTGGTGAGGGAAGGCGGGTGGACGGCGTGCTACCGAGGGTTGGCGCCGCGATGCGCGTCGATGTCGATGTCTGCAACGACAATGATCACTACATATGAGTTCTTGAAACGGCTATCAACCAAGAATCGAGAGGGATTAACAAGCTGA 1041 49.95 MNLGAAEEESPQEIHIPAEIDWKMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLSCIRTAFHLVRHEGFRALYRGFGTSLMGTIPARALYMGALEFTKSYVGTATVRVGFPEATAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQSRFNNPNPSSTRYINGVDAFRKILNADGIRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCYYSKKLDEGNENGGSNIYRPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNREGLTS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6132845 6133885 - Carg09443-RA Car17g00662 165034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00662 346 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Car17g00662 346 Pfam Mitochondrial carrier protein 251 340 IPR018108 -
Car17g00662 346 Pfam Mitochondrial carrier protein 126 217 IPR018108 -
Car17g00662 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 216 IPR018108 -
Car17g00662 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 336 IPR018108 -
Car17g00662 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01383 Car-Chr14:11636042 Car17g00662 Car-Chr17:6132845 4.41E-70 dispersed
Car15g00230 Car-Chr15:1296799 Car17g00662 Car-Chr17:6132845 1.03E-72 dispersed
Car17g00662 Car-Chr17:6132845 Car02g01217 Car-Chr2:8256739 8.26E-23 dispersed
Car01g01330 Car-Chr1:11852113 Car17g00662 Car-Chr17:6132845 1.58E-162 wgd
Car17g00662 Car-Chr17:6132845 Car08g00667 Car-Chr8:4286528 0 wgd
Car17g00662 Car-Chr17:6132845 Car09g00305 Car-Chr9:1693339 2.56E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00662 K15121 - csv:101210602 602.053