Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00668 ATGGCAGCTCCCACGGCTGAAGAAGAAGTTAACGATTCCTTTACCACTTCCCACACGGTGATCGCCATTAGCAGGGACAAGAACAGTCAATATGCGGTTAAATGGGCTGTAGAAAACCTGTTCAACAGGAAGAACTCCGGCGATTGCATCCTCATCCATGTTCGTAGCCAGAGCATGCATCCCCAGGATGCGGATACGGTTCCTAAGGAGTATCGTCCACCGACTGAAGCTGAGTTGCATCAGTTCTTCCTTCCCTTCCGCGGATTCTGTGCACGAAAAGGAATAGTTGCAAAGGAGATAATCATACACGACATTGATGTTCCTAGTGCACTTATTGACTATGTCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAACCGGAATGTTATTTTGAGGAAGTTCAAGCATCCCGATGTCCCAACGTGCTTACTCAAATCAACTCCAGAATCGTGCTCTGTATATGTCATAGGTAGAGGAAAAGTTCATACTAAGAGACTGAAAAAGAAACCGAAGTCACAAACTGATGGTACAGAAACACCACCTAGGGCTCCACATTTGAGCAGGTCTCTATCAAAAATACAAAAATCATCATACTCTAATATCTCAGGACTCTCTGAAGATAAAAGCAGTTCTGGCACCAGTTATGATTCAATGTCAGGCATCAGTGACCATTCGGGGCCTTTCAAATCATTTGAAACATCCTTTGAGAACTTAGAATCTTTCACCTCCTCAGAGACTAATTCGAGGAGCTTTGTGTCCTCTAACACCCCATCTTTCATAGAAGCTGAGATGAGAAAGTTGAGGTTGGAACTCAAACAAACGATGGAAATGTATGAATTAGCTTCCAATGAAGCTATAATAGCAAAACAAAAGGCAAAGGAAATGCAACAATTGAAGATGGAAATGGTAGAAGACCAAAAAATTGAGCGTGGTAAATCTTCAGAAGAGGCTATAACAACGTTGGCCGAGTTTGAGAAGCAGAAGAACAAGGCTGCGACAGAAGCAGCTGTAATGGCACAGAAGTTGGCAGACTTGGAGACCCAGAAAAAACGAGCTATTGTTGAAAATAAAGCTAGGATTGAGGCAGAGGAGATGAAGAAAGCAATTGATTTATTGGAACGCAGTAATGTCTGCTATAAACGATACAGAATTGACGAGATCGAAGCTGCAACAGATCATTTTAATGAGTCTAATAAGATTGGTGAAGGGGGATATGGACCTGTTTACCAAGCCATACTCGATCACACTTCTGTTGCCATTAAGATCTTGAGACCAGATAGATCTCATGGGCAGAAACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGCATGAGGCATCCACACATGGTTCTCCTCTTAGGTGCCTGTCCAGAAAACGGTTGCCTCGTTTACGAATATATGGAAAACGGGAGCTTAGAAGACCGTCTTTTCCGAAAAGATAACACTCCTCCAATCCCTTGGAGTACCCGTTTCAGGATAGCTGCTGACATTGCCACTGCCTTACTCTTCCTTCACCAAATGAAGCCAGAACCTGTGGTGCATCGCGATCTCAAGCCAGCCAACATTCTCTTAGATCACAACTACGTGGGCAAAATAGGTGATGTGGGTTTGGCCAGGCTAGTTCCACCATCGGTTGCCGATAGCGTCACTCAATATCACATGACTGCTGCAGCTGGAACATTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGAGTGTGAAGTCAGATATTTACTCATTTGGTGTTCTGCTACTCCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTCGAGGAGGCCATTGAACACGGCACATTTCCACAGGTACTTGATCCTACAGTTACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTGCAGTGCTGTGAGCTAAGGAAAAGAGACAGGCCTGATCTCCATACAGTTCTATTGCCCGAACTGGTCCGGTTAAAAAATCTAGGATTGAGCAAAATGCCACCAAAGGGAAAACTCCCAGATGTCTGCGAATCACGTGATCGACCGGCCTCTAACTCTAACTCAGCTCCAAAATTAAGGAGATCAGGACATGAGGTTAGTTGA 2118 44.19 MAAPTAEEEVNDSFTTSHTVIAISRDKNSQYAVKWAVENLFNRKNSGDCILIHVRSQSMHPQDADTVPKEYRPPTEAELHQFFLPFRGFCARKGIVAKEIIIHDIDVPSALIDYVSKHSISNIVVGASNRNVILRKFKHPDVPTCLLKSTPESCSVYVIGRGKVHTKRLKKKPKSQTDGTETPPRAPHLSRSLSKIQKSSYSNISGLSEDKSSSGTSYDSMSGISDHSGPFKSFETSFENLESFTSSETNSRSFVSSNTPSFIEAEMRKLRLELKQTMEMYELASNEAIIAKQKAKEMQQLKMEMVEDQKIERGKSSEEAITTLAEFEKQKNKAATEAAVMAQKLADLETQKKRAIVENKARIEAEEMKKAIDLLERSNVCYKRYRIDEIEAATDHFNESNKIGEGGYGPVYQAILDHTSVAIKILRPDRSHGQKQFQQEIEVLSRMRHPHMVLLLGACPENGCLVYEYMENGSLEDRLFRKDNTPPIPWSTRFRIAADIATALLFLHQMKPEPVVHRDLKPANILLDHNYVGKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLSVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGTFPQVLDPTVTDWPIEDTLGLAQLALQCCELRKRDRPDLHTVLLPELVRLKNLGLSKMPPKGKLPDVCESRDRPASNSNSAPKLRRSGHEVS 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6195832 6199520 + Carg09449-RA Car17g00668 165040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00668 705 ProSiteProfiles Protein kinase domain profile. 397 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00668 705 Pfam Protein kinase domain 397 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car17g00668 705 MobiDBLite consensus disorder prediction 165 223 - -
Car17g00668 705 Coils Coil 358 378 - -
Car17g00668 705 Coils Coil 324 351 - -
Car17g00668 705 Pfam Universal stress protein family 20 133 IPR006016 -
Car17g00668 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Car17g00668 705 Coils Coil 267 287 - -
Car17g00668 705 MobiDBLite consensus disorder prediction 192 223 - -
Car17g00668 705 MobiDBLite consensus disorder prediction 671 705 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01318 Car-Chr5:12032700 Car17g00668 Car-Chr17:6195832 2.64E-34 dispersed
Car12g00600 Car-Chr12:3959147 Car17g00668 Car-Chr17:6195832 0 dispersed
Car16g00601 Car-Chr16:3847962 Car17g00668 Car-Chr17:6195832 0 dispersed
Car17g00668 Car-Chr17:6195832 Car19g00547 Car-Chr19:7039718 0 dispersed
Car17g00668 Car-Chr17:6195832 Car08g00664 Car-Chr8:4268001 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89479 PF00069 Pkinase 2.40E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00668 - - bhj:120085014 1152.5