Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00669 ATGGCGGACCATTCTTCCAATCGCGATACTGATTCAGGGTTCGATCATGGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCTTATCGAAATTTCCAGCTTCCAACCTCCCCGGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAACCTCACCTTCTACACGGGTTGCGGTTACCTCGCTGGTGCAGTCGGCGGCGCGTCTACGGGCTTCGTCTCCGGCGTCAAGTCTTTTGAATCAGGTGATACGATGAAACTACGGATCAATCGGATCTTGAACTCGTCTGGTCATTCAGGGCGTCTCTGGGGGAATCGTCTGGGCGTGATTGGGCTGCTATATGCTGGTTTGGAGAGCGGGTTTGAAGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCTGCGGGACTTGGCACCGGTGCGCTTTATCGTGCAGCAAGAGGGGTGAGATCGGCGGCAGTGGCCGGCGCTATTGGCGGCGTCGTGGTTGGTATGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATATGA 573 55.85 MADHSSNRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTGKQMLKRYVPI 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6201454 6202026 + Carg09450-RA Car17g00669 165041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00669 190 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 173 - -
Car17g00669 190 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02933 Car-Chr4:22026741 Car17g00669 Car-Chr17:6201454 4.73E-70 dispersed
Car05g01281 Car-Chr5:11868339 Car17g00669 Car-Chr17:6201454 6.58E-06 dispersed
Car12g00815 Car-Chr12:7823689 Car17g00669 Car-Chr17:6201454 2.28E-71 dispersed
Car12g01242 Car-Chr12:11752674 Car17g00669 Car-Chr17:6201454 3.86E-06 dispersed
Car17g00669 Car-Chr17:6201454 Car08g00663 Car-Chr8:4266168 2.29E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00669 K17794 - csv:101221925 346.665