Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car17g00723 | ATGAAGACAACAAGCTTACCGCCACTATCTGTTCTTAACTATATGATGATCCTTTCCACTGCAATAATGGCGGCCGCCGCCGTCTCCGCCGCCGCTTTTGAGTTCAAAGTCGGCGACGAGATGGGTTGGCAACTTCCCAAGCCGAACAACTCTGAATTCTACAGTTATTGGGCCTCCATTAACCGATTTCAAATCGGAGATTCTCTCTCTTTTGAATACAACAATGATTCCGTTGTGATGGTTGAAAAATGGGATTATTATCACTGCAATTCAAGTGATCCAATACTGAGTTTCGACAACGGGAAAGGCGTTATAAAGCTGGACAGGGCAGGCGCCTTTTACTTCATCAGTGGCTTTCCGGATCACTGTAAAAATGGCCAACGCCTCCTCGTTCAAGTCTTGTCGCCGCCGCTGCCTGATCTCATCGGCCCTTCGCCTGAAGCTTATGATGATGATGCTCCTTCGCCATCGTCCAACAATGCTGGAGTTTCTGTTCAGATCATTAACCTGGCCGTGATCTTCTTCCCCATGGCTGCCGTTGTTGGATTGTTGCTGCTCTGA | 561 | 48.13 | MKTTSLPPLSVLNYMMILSTAIMAAAAVSAAAFEFKVGDEMGWQLPKPNNSEFYSYWASINRFQIGDSLSFEYNNDSVVMVEKWDYYHCNSSDPILSFDNGKGVIKLDRAGAFYFISGFPDHCKNGQRLLVQVLSPPLPDLIGPSPEAYDDDAPSPSSNNAGVSVQIINLAVIFFPMAAVVGLLLL | 186 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 6576187 | 6577011 | + | Carg09505-RA | Car17g00723 | 165095 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car17g00723 | 186 | ProSiteProfiles | Phytocyanin domain profile. | 33 | 135 | IPR003245 | GO:0009055 | |
| Car17g00723 | 186 | Pfam | Plastocyanin-like domain | 49 | 127 | IPR003245 | GO:0009055 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00948 | Car-Chr1:9111882 | Car17g00723 | Car-Chr17:6576187 | 9.34E-32 | dispersed | |
| Car06g00524 | Car-Chr6:2943197 | Car17g00723 | Car-Chr17:6576187 | 7.15E-27 | dispersed | |
| Car13g00879 | Car-Chr13:9268310 | Car17g00723 | Car-Chr17:6576187 | 6.64E-33 | dispersed | |
| Car16g00852 | Car-Chr16:6228714 | Car17g00723 | Car-Chr17:6576187 | 1.03E-23 | dispersed | |
| Car17g00723 | Car-Chr17:6576187 | Car19g00030 | Car-Chr19:214048 | 1.33E-25 | dispersed | |
| Car17g00723 | Car-Chr17:6576187 | Car18g00022 | Car-Chr18:97837 | 5.47E-34 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car17g00723 | - | - | bhj:120087177 | 261.922 |