Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00723 ATGAAGACAACAAGCTTACCGCCACTATCTGTTCTTAACTATATGATGATCCTTTCCACTGCAATAATGGCGGCCGCCGCCGTCTCCGCCGCCGCTTTTGAGTTCAAAGTCGGCGACGAGATGGGTTGGCAACTTCCCAAGCCGAACAACTCTGAATTCTACAGTTATTGGGCCTCCATTAACCGATTTCAAATCGGAGATTCTCTCTCTTTTGAATACAACAATGATTCCGTTGTGATGGTTGAAAAATGGGATTATTATCACTGCAATTCAAGTGATCCAATACTGAGTTTCGACAACGGGAAAGGCGTTATAAAGCTGGACAGGGCAGGCGCCTTTTACTTCATCAGTGGCTTTCCGGATCACTGTAAAAATGGCCAACGCCTCCTCGTTCAAGTCTTGTCGCCGCCGCTGCCTGATCTCATCGGCCCTTCGCCTGAAGCTTATGATGATGATGCTCCTTCGCCATCGTCCAACAATGCTGGAGTTTCTGTTCAGATCATTAACCTGGCCGTGATCTTCTTCCCCATGGCTGCCGTTGTTGGATTGTTGCTGCTCTGA 561 48.13 MKTTSLPPLSVLNYMMILSTAIMAAAAVSAAAFEFKVGDEMGWQLPKPNNSEFYSYWASINRFQIGDSLSFEYNNDSVVMVEKWDYYHCNSSDPILSFDNGKGVIKLDRAGAFYFISGFPDHCKNGQRLLVQVLSPPLPDLIGPSPEAYDDDAPSPSSNNAGVSVQIINLAVIFFPMAAVVGLLLL 186
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 6576187 6577011 + Carg09505-RA Car17g00723 165095
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car17g00723 186 ProSiteProfiles Phytocyanin domain profile. 33 135 IPR003245 GO:0009055
Car17g00723 186 Pfam Plastocyanin-like domain 49 127 IPR003245 GO:0009055
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00948 Car-Chr1:9111882 Car17g00723 Car-Chr17:6576187 9.34E-32 dispersed
Car06g00524 Car-Chr6:2943197 Car17g00723 Car-Chr17:6576187 7.15E-27 dispersed
Car13g00879 Car-Chr13:9268310 Car17g00723 Car-Chr17:6576187 6.64E-33 dispersed
Car16g00852 Car-Chr16:6228714 Car17g00723 Car-Chr17:6576187 1.03E-23 dispersed
Car17g00723 Car-Chr17:6576187 Car19g00030 Car-Chr19:214048 1.33E-25 dispersed
Car17g00723 Car-Chr17:6576187 Car18g00022 Car-Chr18:97837 5.47E-34 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00723 - - bhj:120087177 261.922