Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car17g00746 ATGAACTCCGACAACAATCGAGCTGCTCTTGTAACGGATTTTTGGCCGGAGTTCGTTGCAAGCAGTTGGGGTAAAGAATTTGTCGCCGGCGGGTTCGGTGGCGTCGCCGGCGTTATCTCCGGCCACCCACTAGATACTCTTCGTATCAGGCAACAACAATCCGTTTCTGGGTCTGCTTTCAAAATTGTTCGTAATATCATTGCTAATGATGGCCCCGTCGGTCTTTATAGAGGCATGTCTGCTCCGTTCGCCTCTATCACTTTTCAGAACGCGGCCGTGTTTCAAATCTACGCGATCCTTTCTCGAGCATTCACCTCCTCGTCGGCTCAATCCAACGGCGACCCACCAAGCTACAAGGCAGTAGCAATGGGAGGATTTGGCACCGGAGCACTACAGAGCTTCTTCCTAACGCCGGTGGAGCTGGTGAAGATCCGCCTACAATTACAGACATCAACCCAACAACCAATTTCTTCTTCATCATCATCATCTCACAAAGGCCCATTAAGCGTCGCCAAGAGCATCTACAAAACAGAGGGATTAAGAGGCATTTACAGAGGACTTACCATAACCATGCTCCGAGACGCCCCTGCCCATGCCGTCTATTTCTGGACCTATGAGTGCATGAGGGAGCAGTTTCAACCCGGCTGCCGGAGCTCCGGGGAAGAGAGATTCAGCACGGCGTTGGTCGCCGGAGGGCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCGTTGGATGTGTTGAAGACAAGAATTCAAGCTCCGACACAAAGGTTGTCGCCGAGGTATAAGGGAATTGTGGATTGTGTTAGCAAGAGTGTTAGGGAAGAGGGTTATAGAGTGCTGTGGCGAGGCCTGGAGACGGCTGTTGCTAGAGCTTTTGTGGTGAATGGGACCATTTTTGGTGCTTATGGGTTAACTTTGAGGTGTTTATTTAGCAATGGAAGCAATTAG 954 50.73 MNSDNNRAALVTDFWPEFVASSWGKEFVAGGFGGVAGVISGHPLDTLRIRQQQSVSGSAFKIVRNIIANDGPVGLYRGMSAPFASITFQNAAVFQIYAILSRAFTSSSAQSNGDPPSYKAVAMGGFGTGALQSFFLTPVELVKIRLQLQTSTQQPISSSSSSSHKGPLSVAKSIYKTEGLRGIYRGLTITMLRDAPAHAVYFWTYECMREQFQPGCRSSGEERFSTALVAGGLAGVASWVFCYPLDVLKTRIQAPTQRLSPRYKGIVDCVSKSVREEGYRVLWRGLETAVARAFVVNGTIFGAYGLTLRCLFSNGSN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6665778 6667714 - Carg09528-RA Car17g00746 165118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car17g00746 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 211 IPR018108 -
Car17g00746 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 103 IPR018108 -
Car17g00746 317 Pfam Mitochondrial carrier protein 223 313 IPR018108 -
Car17g00746 317 Pfam Mitochondrial carrier protein 123 213 IPR018108 -
Car17g00746 317 Pfam Mitochondrial carrier protein 22 106 IPR018108 -
Car17g00746 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 222 310 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01160 Car17g00746 CCT
Car01g00097 Car17g00746 CCT
Car08g00582 Car17g00746 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00583 Car-Chr6:3343194 Car17g00746 Car-Chr17:6665778 3.48E-47 dispersed
Car16g01093 Car-Chr16:9384902 Car17g00746 Car-Chr17:6665778 2.10E-49 dispersed
Car17g00746 Car-Chr17:6665778 Car19g00196 Car-Chr19:1845766 1.34E-10 dispersed
Car01g00097 Car-Chr1:505834 Car17g00746 Car-Chr17:6665778 4.68E-139 wgd
Car14g01160 Car-Chr14:10171679 Car17g00746 Car-Chr17:6665778 3.56E-141 wgd
Car17g00746 Car-Chr17:6665778 Car08g00582 Car-Chr8:3825606 1.04E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car17g00746 K15109 - csv:101222165 471.085