Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car17g00746 | ATGAACTCCGACAACAATCGAGCTGCTCTTGTAACGGATTTTTGGCCGGAGTTCGTTGCAAGCAGTTGGGGTAAAGAATTTGTCGCCGGCGGGTTCGGTGGCGTCGCCGGCGTTATCTCCGGCCACCCACTAGATACTCTTCGTATCAGGCAACAACAATCCGTTTCTGGGTCTGCTTTCAAAATTGTTCGTAATATCATTGCTAATGATGGCCCCGTCGGTCTTTATAGAGGCATGTCTGCTCCGTTCGCCTCTATCACTTTTCAGAACGCGGCCGTGTTTCAAATCTACGCGATCCTTTCTCGAGCATTCACCTCCTCGTCGGCTCAATCCAACGGCGACCCACCAAGCTACAAGGCAGTAGCAATGGGAGGATTTGGCACCGGAGCACTACAGAGCTTCTTCCTAACGCCGGTGGAGCTGGTGAAGATCCGCCTACAATTACAGACATCAACCCAACAACCAATTTCTTCTTCATCATCATCATCTCACAAAGGCCCATTAAGCGTCGCCAAGAGCATCTACAAAACAGAGGGATTAAGAGGCATTTACAGAGGACTTACCATAACCATGCTCCGAGACGCCCCTGCCCATGCCGTCTATTTCTGGACCTATGAGTGCATGAGGGAGCAGTTTCAACCCGGCTGCCGGAGCTCCGGGGAAGAGAGATTCAGCACGGCGTTGGTCGCCGGAGGGCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCGTTGGATGTGTTGAAGACAAGAATTCAAGCTCCGACACAAAGGTTGTCGCCGAGGTATAAGGGAATTGTGGATTGTGTTAGCAAGAGTGTTAGGGAAGAGGGTTATAGAGTGCTGTGGCGAGGCCTGGAGACGGCTGTTGCTAGAGCTTTTGTGGTGAATGGGACCATTTTTGGTGCTTATGGGTTAACTTTGAGGTGTTTATTTAGCAATGGAAGCAATTAG | 954 | 50.73 | MNSDNNRAALVTDFWPEFVASSWGKEFVAGGFGGVAGVISGHPLDTLRIRQQQSVSGSAFKIVRNIIANDGPVGLYRGMSAPFASITFQNAAVFQIYAILSRAFTSSSAQSNGDPPSYKAVAMGGFGTGALQSFFLTPVELVKIRLQLQTSTQQPISSSSSSSHKGPLSVAKSIYKTEGLRGIYRGLTITMLRDAPAHAVYFWTYECMREQFQPGCRSSGEERFSTALVAGGLAGVASWVFCYPLDVLKTRIQAPTQRLSPRYKGIVDCVSKSVREEGYRVLWRGLETAVARAFVVNGTIFGAYGLTLRCLFSNGSN | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6665778 | 6667714 | - | Carg09528-RA | Car17g00746 | 165118 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car17g00746 | 317 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 116 | 211 | IPR018108 | - | |
Car17g00746 | 317 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 24 | 103 | IPR018108 | - | |
Car17g00746 | 317 | Pfam | Mitochondrial carrier protein | 223 | 313 | IPR018108 | - | |
Car17g00746 | 317 | Pfam | Mitochondrial carrier protein | 123 | 213 | IPR018108 | - | |
Car17g00746 | 317 | Pfam | Mitochondrial carrier protein | 22 | 106 | IPR018108 | - | |
Car17g00746 | 317 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 222 | 310 | IPR018108 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car14g01160 | Car17g00746 | CCT | |
Car01g00097 | Car17g00746 | CCT | |
Car08g00582 | Car17g00746 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00583 | Car-Chr6:3343194 | Car17g00746 | Car-Chr17:6665778 | 3.48E-47 | dispersed | |
Car16g01093 | Car-Chr16:9384902 | Car17g00746 | Car-Chr17:6665778 | 2.10E-49 | dispersed | |
Car17g00746 | Car-Chr17:6665778 | Car19g00196 | Car-Chr19:1845766 | 1.34E-10 | dispersed | |
Car01g00097 | Car-Chr1:505834 | Car17g00746 | Car-Chr17:6665778 | 4.68E-139 | wgd | |
Car14g01160 | Car-Chr14:10171679 | Car17g00746 | Car-Chr17:6665778 | 3.56E-141 | wgd | |
Car17g00746 | Car-Chr17:6665778 | Car08g00582 | Car-Chr8:3825606 | 1.04E-163 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car17g00746 | K15109 | - | csv:101222165 | 471.085 |